Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00400 atgattattctaAGTACTGGGTTTGTTGgCGTGATTTTGGGGATAGAAAAAGGTACTGCTCTGTTTGCTAAGTTTTCTGTCGCAAGTTCTCGTCTTGAGGGAATAGAAATGGGATCTGGGAATGAGGTTCACTCGGTGGGCGAGTTCAACTTAGATGCCAAGTGGTTGATAGATCCCAAGCAATTATTCGTTGGACCCAAAATTGGGGAAGGTGCGCATGCCAAAGTGTACGAAGGAAAatataaaaatcaaaatgttgctgttaaaatcattaataaggGAGAAACCCCAGAACAGATTGCAAGAAGAGAGGCTCGGTTTGGCAGGGAGGTTGCTATGTTATCAAGAGTTCAACACAAAAATCTGGTGAAGTTTATTGGTGCCTGCAAAGAACCTGTAATGGTTATAGTGACTGAGCTTCTATTAGGTGGAACATTGCGCAAATATCTCTTGAATATGCGACCAAAGTGCTTGGATATGCGTGTTGCAGTTGGATTTGCTCTTGACATTGCCCGAGCAATGGAGTGTTTGCACTCCCACGGGATCATTCACCGGGACCTTAAACCTGAAAACTTGATCTTGACAGCAGATCATAGAACGGTTAAACTTGCTGATTTCGGTTTAGCCAGAGAAGAGTCGTTAACAGAGATGATGACTGCTGAAACGGGGACATATCGTTGGATGGCTCCAGAACTTTACAGTACTGTCACTCTAAGACAGGGAGAGAAAAAGCATTACAATCATAAGGTGGATGCCTACAGCTTTGCAATTGTGTTGTGGGAACTCATCCATAATAAGCTGCCCTTTGAAGGCATGTCTAATTTACAGGCAGCATATGCAGCTGCTTTTAAGAATGTGAGGCCCAGTGCTGAAGACCTTCCTCAGGATTTAGCTATGATTGTGACTTCATGTTGGAAAGAGGACCCAAATGACCGACCCAACTTTAGCCAAATAATACAGATGCTCCTTCACTATCTCTCCACTATTTCACCACCAGTGCCCGTTATTCCGGCGCGAATGCCTTCATCTGAGAATGCTGTGCTGCCACCAGAATCTCCTGaaaagcaaaagcttAAATACCCAGAAGCGGAAACggtctctttctctctcgaATGCGATTTCGAAACTTCTGTCATCTTGTTCTTCGGTAGCATGGCTAGGAGCTGGTTTATTGACATAGGAGGATTtgcaaagaaagtgaaaaacacTACTCTGTCTTCAGCTGATCAAATCAAAGACTGTGGAGCTTATCGTGAATGCCCGAAGTGTCATTATCATATTGATAACAGTGATGTTTCTTCTGAGTGGCCTGGCTTTCCCGTTGGTGTGAAGTTTGATCCTACTGATGCAGAGCTATTAGATCATTTAGCTGCAAAATGTGGCATTGGGAACCTAGAGCCACATATCTTTATCAATGAGTTCATCCCAACATTAGTGGGAGATCAAGGTATCTGCTACACACATGCAGAAAATCTTCCAGgTGCTAAGAAAGATGGGAACAGTGTCCATTTTTTTCACAGAACAATGAATGCATATACTACTGGTCAACGAAAGCGTCGAAAGATTCATGATGAACGTGGTTTGAGTGAGGAGCATGTTAGGTGGCACAAGACTGGAAAGACCAAGCCTGTGATCGAAGATGGAGTTCATAAAGGCTTTAAAAAGATCATGGTTCTTTATCTAAGATCTAAGAATGAGAAAGGGTCCAAGCCATATAAATCCAATTGGGTGATGCATCAATACCATCTAGGGACAGAAGATGAGAAGGATAGTGAATACGtggtttcaaaaattttttatcaacagAAGCAGACTGAGAAAAATGAGGAGATTCCTATTGTTGAAGATTCTGATAATATGACATCACGAACAAGTCCAAAAACACCAAAACCAAATCCTCCCAATGCACCTCGTCCTGGAAAATCTGTTGACTTTGACGATgattatgaagaaaatttgttgcCATTATTGACACAGGATCTCAAGTCTATCCCTGGCAAATCAGGTGGTCCATCTGATTTTCAAGGTGGGGAAAATACAGGCGATCATACATGCCTAGCTGGTGAATCACAGGCTGTTGAAAACTCTGACTTTGATGGATTGGATGATATCTTACTGTGCAAGGAGAACTTTGATTCTTCTACTCTCTTAAATGATTCTGTATTGGACAGCACTACTTTCAATGGCTTTACTACCAACACAAACGAGTTGGCTGGGAATGATAATATCTCCTACGAAATATCTGACCTTGTTGACCTGCATTTTGATTCTCAACCAGATTTCCTACTTGATTGGGTAAACAAGTTATG 2309 0.3989 MIILSTGFVEKGTALFAKFSVASSRLEGIEMGSGNEVHSVGEFNLDAKWLIDPKQLFVGPKIGEGAHAKVYEGKYKNQNVAVKIINKGETPEQIARREARFGREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHRTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSAEDLPQDLAMIVTSCWKEDPNDRPNFSQIIQMLLHYLSTISPPVPVIPARMPSSENAVLPPESPEKQKLKYPEAETVSFSLECDFETSVILFFGSMARSWFIDIGGFAKKVKNTTLSSADQIKDCGAYRECPKCHYHIDNSDVSSEWPGFPVGVKFDPTDAELLDHLAAKCGIGNLEPHIFINEFIPTLVGDQGICYTHAENLPGAKKDGNSVHFFHRTMNAYTTGQRKRRKIHDERGLSEEHVRWHKTGKTKPVIEDGVHKGFKKIMVLYLRSKNEKGSKPYKSNWVMHQYHLGTEDEKDSEYVVSKIFYQQKQTEKNEEIPIVEDSDNMTSRTSPKTPKPNPPNAPRPGKSVDFDDDYEENLLPLLTQDLKSIPGKSGGPSDFQGGENTGDHTCLAGESQAVENSDFDGLDDILLCKENFDSSTLLNDSVLDSTTFNGFTTNTNELAGNDNISYEISDLVDLHFDSQPDFLLDWVNKL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00400 763 ProSiteProfiles Protein kinase domain profile. 56 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00400 763 Gene3D Transferase(Phosphotransferase) domain 1 137 327 - -
Bva03g00400 763 Gene3D Phosphorylase Kinase; domain 1 44 135 - -
Bva03g00400 763 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Bva03g00400 763 SUPERFAMILY Protein kinase-like (PK-like) 48 342 IPR011009 -
Bva03g00400 763 MobiDBLite consensus disorder prediction 603 641 - -
Bva03g00400 763 Pfam No apical meristem (NAM) protein 434 577 IPR003441 GO:0003677|GO:0006355
Bva03g00400 763 Gene3D NAC domain 442 600 IPR036093 GO:0003677|GO:0006355
Bva03g00400 763 SMART serkin_6 56 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00400 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Bva03g00400 763 PANTHER SERINE-THREONINE PROTEIN KINASE 31 359 - -
Bva03g00400 763 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Bva03g00400 763 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Bva03g00400 763 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Bva03g00400 763 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Bva03g00400 763 ProSiteProfiles NAC domain profile. 433 595 IPR003441 GO:0003677|GO:0006355
Bva03g00400 763 CDD STKc_MAP3K-like 62 316 - -
Bva03g00400 763 PANTHER PROTEIN KINASE ATN1 31 359 - -
Bva03g00400 763 SUPERFAMILY NAC domain 417 595 IPR036093 GO:0003677|GO:0006355
Bva03g00400 763 Pfam Protein tyrosine and serine/threonine kinase 59 316 IPR001245 GO:0004672|GO:0006468
Bva03g00400 763 MobiDBLite consensus disorder prediction 655 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00400 Bva-Chr3 2271903 2279887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00400 31 347 MAP Kinase Kinase Kinase AT3G27560 82.445 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva03g00400 PK_Tyr_Ser-Thr 4.7e-57 CL0016
TF NAC Bva03g00400 PK_Tyr_Ser-Thr 4.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00400 - - gmx:100792887 600.512