LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g00391	atgGTGGTGAGAAGAGCAGGGTTATGCTTTGCTAGCACAATTTCCAAATCTGCTCAAgGATCTTTCGTGGAGATGAATTCTAAGAAAGAAGCTGCATCAAGCGACAGTAGTATCAAGGAGAAAGACCAACTTCCCCACCAATCTAATGCTTCTGGAGCTCGATCTTCCACCAAGCAACCTTTCTTCATAGGGGTTGCTGGTGGAACTGCGTCTGGCAAAACAACTGTCTGCAATATGATAATTACTCAGCTTCATGACCATCGTATTATCCTTATTAATCAGGATTCGTTTTACCACTCCTTGGATGCCAAGATGTTGCAGAAAGTTAATGAGTACAATTTTGATCATCCTGATGCCTTTAATATGGAGCTTATGCTTTCATGTGTGGAGAAATTAAAAGGCGGACTCACCGTCAATATACCAAATTATGATTTCAAAAGCCATAAGAACACTGAACATGCACGTCAGGTCTATCCAGCAGATGTCATAATTTTAGAAGGGATATTAATTCTTCATGATTCTCGTGTCCGTGATCTGTTAAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTCGCACGGAGGATTCGGCGAGATACTATTGAACGTGGGAGGAGCATCCAGAATGTTCTTGACCAGTATACCAAATCTGTAAAACCCAGTTTTGAAGAGTTCGTACTGCCCACAAAAAAGTACGCCGATATCATCATCCCTCGTGGAGGAGACAATGATGTTGCCATTGACTTGATAGTACAACATATACGTATGAAGCTGGGACAGCATAATCTGTGTAAAATATatccaaatatttttgtcatacaTTCCACATTTCAGATAAGGGGAATGCATACCCTTATACGTGATGTCAGAACAACAAAGCATGATTTCGTCTTTTACTCGGACCGCCTTATTCGCCtgGTTGTGGAGCATGGACTAGGTCACCTTCCTTTTACTGAAAAGCAGGTCATAACACCAACAGGATCTGTATACTCTGGGGTTGTTTTCTGCAGAAGTTTGTGTGGAGTGTCAGTGATTAGAAGTGGAGAAAGCATGGAAAACGCATTAAGAGCATGCTGTAAGGGAATCAAAATTGGTAAAATCCTTATTCATGGAGAAGGCACTAATGGCCGGCAGTTAGTCTATGAGAAGCTACCAACAGATATTGCAAGCCGCCATGTATTGTTGCTTGATCCAGTTCTGGCCACAGGAAATTCTGCAGTCAAAGCTATATCTCTGCTTGTTAGTAAGGGTGTGCCAGAATCAAACATTatctttctaaatttaataGCAGCACCAGAAGGAATACATGCAGTCTGTAAGAGATTTCCTATGCTGAAAATTGTGACTTCGGAGATTGATGCGTCACTGAATGAGAATTTACATGTGACACCTGGTATGGGGGAGTTTGGAGATCGATACTTTGGCACTGATACTTG	1442	0.4064	MVVRRAGLCFASTISKSAQGSFVEMNSKKEAASSDSSIKEKDQLPHQSNASGARSSTKQPFFIGVAGGTASGKTTVCNMIITQLHDHRIILINQDSFYHSLDAKMLQKVNEYNFDHPDAFNMELMLSCVEKLKGGLTVNIPNYDFKSHKNTEHARQVYPADVIILEGILILHDSRVRDLLNMKIFVDEDSDVRLARRIRRDTIERGRSIQNVLDQYTKSVKPSFEEFVLPTKKYADIIIPRGGDNDVAIDLIVQHIRMKLGQHNLCKIYPNIFVIHSTFQIRGMHTLIRDVRTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVVFCRSLCGVSVIRSGESMENALRACCKGIKIGKILIHGEGTNGRQLVYEKLPTDIASRHVLLLDPVLATVKAISLLVSKGVPESNIIFLNLIAAPEGIHAVCKRFPMLKIVTSEIDASLNENLHVTPGMGEFGDRYFGTDT	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g00391	476	CDD	PRTases_typeI	341	447	IPR000836	-
	Bva03g00391	476	PANTHER	URIDINE KINASE-LIKE PROTEIN 5	40	472	-	-
	Bva03g00391	476	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	56	252	IPR027417	-
	Bva03g00391	476	PANTHER	URIDINE KINASE	40	472	-	-
	Bva03g00391	476	Gene3D	-	270	475	IPR029057	-
	Bva03g00391	476	Pfam	Uracil phosphoribosyltransferase	277	474	-	-
	Bva03g00391	476	TIGRFAM	udk: uridine kinase	59	259	IPR000764	-
	Bva03g00391	476	Gene3D	-	58	269	IPR027417	-
	Bva03g00391	476	MobiDBLite	consensus disorder prediction	32	55	-	-
	Bva03g00391	476	SUPERFAMILY	PRTase-like	262	475	IPR029057	-
	Bva03g00391	476	Pfam	Phosphoribulokinase / Uridine kinase family	62	248	IPR006083	GO:0005524\|GO:0016301
	Bva03g00391	476	CDD	UMPK	62	257	IPR000764	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	135	150	-	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	191	201	-	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	90	101	-	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	205	216	-	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	227	240	-	-
	Bva03g00391	476	PRINTS	Uridine kinase signature	60	77	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g00391	Bva-Chr3	2228610	2234075	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva03g00391	47	475	PRT Gene Family	AT4G26510	74.596	0.0	674

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g00391	K00876		-	fve:101308315	693.73