Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00372 ATGTGCAAAAAGATTAAGagttctccttcttcttcagaTTCAGATACTGGTACACAAGAACAAACGCAAATTAACTTTCTCTCCACTCAAACGCAAAGAAAATCAGATTCTCCTTCTCTGTCTATAATTACAGCACCTCAACCTCGCCGCAGAAACAGAACCAAAACTAGAAAGCCCAAATTCTTGAGTCTCCGTCTTCAACTCTCTCCGCCGCCCGCTCCCTCCAAGTCTAACCCAATGACTACCCGCCTCGAAGAAACCCATCAGGGTCAGCACCAACAACAGCAGCTCAACTTGTTTCCTCTTCACCCGGAAAAGTACTTGGTCGAGGATAACAACGTTGCTTTGCTGTTTTGCTCCGATGCTTGCGGAGCCACCCTCAACGGCGTGCTGGAGGCCGAATCGGAATCGCCCACTACTTCTACTACTACTGCCACCACGAACACGATGACGACCACCACCACCACGACGTCGGAGGAGGAGTCTTTGTCGCCTCCGTCGTTGAGGTACTGGGCGTTTCAGTTCGGGGGCGATTATAATGCGAGCTTGCTGGTGAAGAGGGCGATGAAGAGGTGGAACAGAGAGACGGATGCGGAAGCGAGGGAGGAGAAATGGGTGTCTTACTCGCAAGTGGTGGAGAAGAAAGAGCCGGCGGACGAGGTTACCAGTTACTGTTACTGTACTACTTCCACTGCCTTAGAGGGCTCCGATGAAAAAACAATGACAAATACGACGACGTTTGGCTTATCGTCCTTGAATTTGAAGCTTGACTACGACGGAATTCTCAGCGCTTGGTCCCATAAAGGCTGCTCTCTTTACGTCGGAGGGGAGCCCCAAAACAGTGTCCCTCACTTCCATCCTCCTCCCAAGGTTTTATGGAGGAACGCGTGTAAAGTTGGAGAGAGTGAGAGTGAGACGGGTAAAGgaatgaaggaagaagaaatgggaTGGAAATTGGGGAAAAGAGAAGCAAGCCTGTTGAGATACAAGGAGAAGAGGCAAAGCAGACTGTTTTCTAAGCAAATCCGCTATGAGGTCCGCAAGCTCAATGCCCAGAAGCGACCCCGCATGAAGGGGCGATTTGTGAAGAGGGATTG 1097 0.4859 MCKKIKSSPSSSDSDTGTQEQTQINFLSTQTQRKSDSPSLSIITAPQPRRRNRTKTRKPKFLSLRLQLSPPPAPSKSNPMTTRLEETHQGQHQQQQLNLFPLHPEKYLVEDNNVALLFCSDACGATLNGVLEAESESPTTSTTTATTNTMTTTTTTTSEEESLSPPSLRYWAFQFGGDYNASLLVKRAMKRWNRETDAEAREEKWVSYSQVVEKKEPADEVTSYCYCTTSTALEGSDEKTMTNTTTFGLSSLNLKLDYDGILSAWSHKGCSLYVGGEPQNSVPHFHPPPKVLWRNACKVGESESETGKGMKEEEMGWKLGKREASLLRYKEKRQSRLFSKQIRYEVRKLNAQKRPRMKGRFVKRD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00372 365 MobiDBLite consensus disorder prediction 133 163 - -
Bva03g00372 365 Pfam CCT motif 322 364 IPR010402 GO:0005515
Bva03g00372 365 MobiDBLite consensus disorder prediction 1 84 - -
Bva03g00372 365 PANTHER CCT MOTIF FAMILY PROTEIN 45 365 - -
Bva03g00372 365 ProSiteProfiles CCT domain profile. 322 364 IPR010402 GO:0005515
Bva03g00372 365 MobiDBLite consensus disorder prediction 1 49 - -
Bva03g00372 365 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 45 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00372 Bva-Chr3 2147233 2150312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00372 250 364 C2C2-CO-like Transcription Factor Family AT1G73870 44.628 8.61e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva03g00372 CCT 2.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00372 - - gmx:100798231 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00372 03 2147233 2150312 Bva03g00372 03 2147233 2150312 ECH