Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00354 ATGGGAAGACAGCCTTGTTGTGATAAGGTTGGTTTGAAGAGAGGGCCATGGACAATTGAGGAAGATCACAAGCTTATAAACTTCATCCTCAACAATGGCATCCATTGCTGGCGAATGGTTCCCAAGCTTGCAGGTAGCCTATTAAGATGTGGGAAGAGTTGCAGATTGAGATGGATTAATTATCTGAGGCCAGACCTCAAGAGAGGTGGACTTACAGAAATGGAAGAGGATCAAATTATTCAACTGCATTCACGTCTTGGTAACAGGTGGTCTAAGATCGCTGCACATTTTCCTGGGAGGACAGATAATGAAATCAAGAACCATTGGAACACAAGAATCAAGAAGAGGTTAAAGCTCCTCGGTCTGGACCCCGTGACCCACAAGCCAATTAAGCAAAAGGAACAAACTGACGATAAAAGTAAGACAATCCAACAGCCAATGTCTGCAGAAGGGTATGAGGAAAATATGGGAATGAAGTCATTGGAAAGTCATGCTACAGAAAAGATGCCAAAAACAGGAGGAAACattgaagaaaacaagagcACTTTGGGCTATACTACAGATACTGAGCTTGCGAACAATTATGAACTGCTATCTTCAAACTTGGACTTGGGATCATGGATGATCCAAGAAACCAACACCAGTACTAGTTCTTACAGTAGTTCTTCCTTCTCTCTGGATGATTCTAGCCATCTTTCTATGGTTGAATCCCCCTATCTTCTGGAAATTCCCTTACAGCAATGGGTTGATAGTATGGATCCTATTCTCTCATGGGATATCTTCAATCCTCTTGAACaagatcttttctttttcgaaAACAGGCAATA 827 0.4039 MGRQPCCDKVGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGSLLRCGKSCRLRWINYLRPDLKRGGLTEMEEDQIIQLHSRLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKRLKLLGLDPVTHKPIKQKEQTDDKSKTIQQPMSAEGYEENMGMKSLESHATEKMPKTGGNIEENKSTLGYTTDTELANNYELLSSNLDLGSWMIQETNTSTSSYSSSSFSLDDSSHLSMVESPYLLEIPLQQWVDSMDPILSWDIFNPLEQDLFFFENRQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00354 275 PANTHER MYB DOMAIN PROTEIN 40 2 250 - -
Bva03g00354 275 Gene3D - 11 68 - -
Bva03g00354 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bva03g00354 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bva03g00354 275 Gene3D - 71 148 - -
Bva03g00354 275 MobiDBLite consensus disorder prediction 129 151 - -
Bva03g00354 275 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bva03g00354 275 CDD SANT 16 62 IPR001005 -
Bva03g00354 275 SMART sant 13 64 IPR001005 -
Bva03g00354 275 SMART sant 67 115 IPR001005 -
Bva03g00354 275 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bva03g00354 275 Pfam Myb-like DNA-binding domain 72 111 IPR001005 -
Bva03g00354 275 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 250 - -
Bva03g00354 275 CDD SANT 72 111 IPR001005 -
Bva03g00354 275 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva03g00354 275 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00354 Bva-Chr3 2092510 2093617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00354 1 198 MYB Transcription Factor Family AT5G16600 56.585 5.48e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00354 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00354 K09422 - gmx:100783231 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00354 03 2092510 2093617 Bva03g00354 03 2092510 2093617 ECH