Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00352 ATGGTGAGCGAAGAGCAAAAAGGCACCCCACAAAACCAGAAGAAACCAGCAAGGGAAACGAACCCTGTGGGAATTGGCGAAAATGGGGATAGCGTTTTCAGCCCAAGATTCAAATCTGCGGCTGCTATGGCTGGTTGGGATGAAGAGGCGCTACTACTCGCCAGCCTAATTGTTGAAGACACCCCCGAGAGAGATTCCAAGTACAAGAAACGCTCTAATTTGAACTTCAAGACTCCACCCACCAATTCCACAAGAAAACGCAGGGCTCATAGGAGTCCACAGTCAATCCCAGCAGCTGTTATTAACCTTGATGAAGAAGAACCTCCAAgaaaagAtagtgagaaaaagaagagagaaaagaaaaatggggcCAATACTGATGCCGATAGTAAAGTAGCGGAGAAAGAAATATCTGAGAAGAGATCTGGTGATTCATCTTCGAGTTCTGCTCTTCCTTGCATTGACAAACTCAGGGAGGAGCTCTCATGTGCGATTTGTTTGGAGATATGCTTCGAACCCAGTACTACTCCTTGTGGGCATagCTTTTGTAGAAAATGTTTGCGATCTGCTGCTGACAAATGCGGGAAAAGGTGCCCAAAATGCAGAGAAATGATAAGTAATGGACGATCTTGCACGGTGAACACAGTTCTTTGGAACACAATACAGCTCCTTTTTCCCCAGGAAGTTGAAGCAAGGAAAGCAGCTGGTGCCTTAAATAGTAGAGAAGCTGCTCAGTGTTTGAGTCCGGAAAAGGCATTTTATGGTAGTCTAAGGAATCGAAACACACAAACATCTGGGGTATCAAGTTCAAGGAGAAGAGGAACACAATCCCAAGATGTTGAGGATTCTGCATTCGTTAGAAGGATTCTTAGAGAACTGGAGGGGCAAAGCCAGGGGAGACTCGTCAACAATTCAAGGAATCAAATTCCATCATCTGCAAGAGCGAGGATGAGAAGAGGGATTGCTAGCCAAGATGAGGATGCTGCTTTGGCTCTCAGGATGCAGAGAGAAGAATTTATGGAGGCTTTTAGGGAAAGTCGGGGACAATCTAGTAGTAGACCTTTGTCCTTGGCCAGAGCAAACGTGAGGGCAATGGCATCCAGAGCCATCAATCTTCGCACAAGAGATCGAAGATA 1136 0.4428 MVSEEQKGTPQNQKKPARETNPVGIGENGDSVFSPRFKSAAAMAGWDEEALLLASLIVEDTPERDSKYKKRSNLNFKTPPTNSTRKRRAHRSPQSIPAAVINLDEEEPPRKDSEKKKREKKNGANTDADSKVAEKEISEKRSGDSSSSSALPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKRCPKCREMISNGRSCTVNTVLWNTIQLLFPQEVEARKAAGALNSREAAQCLSPEKAFYGSLRNRNTQTSGVSSSRRRGTQSQDVEDSAFVRRILRELEGQSQGRLVNNSRNQIPSSARARMRRGIASQDEDAALALRMQREEFMEAFRESRGQSSSRPLSLARANVRAMASRAINLRTRDRR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00352 378 MobiDBLite consensus disorder prediction 104 142 - -
Bva03g00352 378 MobiDBLite consensus disorder prediction 60 150 - -
Bva03g00352 378 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
Bva03g00352 378 PANTHER - 317 377 - -
Bva03g00352 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 232 IPR013083 -
Bva03g00352 378 PANTHER - 25 243 - -
Bva03g00352 378 MobiDBLite consensus disorder prediction 1 33 - -
Bva03g00352 378 ProSiteProfiles Zinc finger RING-type profile. 163 202 IPR001841 -
Bva03g00352 378 MobiDBLite consensus disorder prediction 1 18 - -
Bva03g00352 378 MobiDBLite consensus disorder prediction 259 280 - -
Bva03g00352 378 PANTHER UNCHARACTERIZED 317 377 - -
Bva03g00352 378 SUPERFAMILY RING/U-box 155 226 - -
Bva03g00352 378 Pfam Zinc finger, C3HC4 type (RING finger) 163 201 IPR018957 GO:0046872
Bva03g00352 378 PANTHER UNCHARACTERIZED 25 243 - -
Bva03g00352 378 SMART ring_2 163 201 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00352 161 206 C3H Transcription Factor Family AT3G26730 44.444 1.67e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00352 - - qsu:112025947 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00352 03 2085064 2086954 Bva03g00352 03 2085064 2086954 ECH