Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00346 ATGAACGAATACTCAGAATATAAAGATGGTTCTTCTTTTCCACTGACTTCGAAGAGGAGAAAGCTCGCCGACATTGATTCTATGGAGACTGAGGCAGCtaagGCTAAGCTTACAGCTATTAGGGAAAGTGTTGGACGAGAGATCCGTGTATTTGAAACGTCAGCACTTTCTCCATCGCCAAATACTTCATCAAACAATGAGGAGAGTGATGACTTCTATGAGTTCACTGCTGAAGATTATTACCGGCTTATGGCAACTAAAAAGGAAgATAAATTCTTGAAGACTCGAAAAATCAGAGAAGCAGAAGAGGCAGCTCGTAGGTCCAGACTAACAAAAGCTGTAATTAGAGTTCGATTCCCTGATAATCACACATTAGAGGCTAAATTTCACCCATCAGAAACACTCCAGAGTTTGATTGATCTCCTTGTAAAAGTGATTGCACAACCTGAGCTGCCGTTTTATATTTATACTACCCCACCTAAGAAGCTAATCAAAGATTTGACTCAGGATTTTTACACTGCCAGTTTTTGTCCTGGCGCCATTGTGTACTTCTCTTATGATGTTCCCAGAGGTGATAACACTGATGCTGTTCATGTTAGCTCTTTCCTTCAAGAAGAGATATTGTCGTTGAAGGATTTGGATCTTGTTAATGAGCAGGGTCAGCAATCCGAGCCTGTACAGTCTGCTTCAGAGTCTGATGCAGCAAAAGCCACAGCACAAACCCCTGCGGTTGAAGAACGTAAGCCTGCTGAGAAAAAGCTTGTTAAACCAAAATGGCTAAAGATGTG 788 0.415 MNEYSEYKDGSSFPLTSKRRKLADIDSMETEAAKAKLTAIRESVGREIRVFETSALSPSPNTSSNNEESDDFYEFTAEDYYRLMATKKEDKFLKTRKIREAEEAARRSRLTKAVIRVRFPDNHTLEAKFHPSETLQSLIDLLVKVIAQPELPFYIYTTPPKKLIKDLTQDFYTASFCPGAIVYFSYDVPRGDNTDAVHVSSFLQEEILSLKDLDLVNEQGQQSEPVQSASESDAAKATAQTPAVEERKPAEKKLVKPKWLKM 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00346 262 Gene3D - 45 183 - -
Bva03g00346 262 MobiDBLite consensus disorder prediction 245 262 - -
Bva03g00346 262 MobiDBLite consensus disorder prediction 219 262 - -
Bva03g00346 262 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 16 262 IPR044232 GO:0032984|GO:0051117
Bva03g00346 262 MobiDBLite consensus disorder prediction 219 237 - -
Bva03g00346 262 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 16 262 - -
Bva03g00346 262 CDD UBX2_UBXN9 113 186 - -
Bva03g00346 262 ProSiteProfiles UBX domain profile. 108 184 IPR001012 GO:0005515
Bva03g00346 262 SUPERFAMILY Ubiquitin-like 86 184 IPR029071 -
Bva03g00346 262 Pfam UBX domain 112 176 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00346 Bva-Chr3 2035528 2039661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00346 44 143 C2H2 Transcription Factor Family AT2G01650 32.692 6.53e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00346 K15627 - gmx:100818386 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00346 03 2035528 2039661 Bva03g00346 03 2035528 2039661 ECH