Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00330 ATGGTTTCCGTCTACTTCCTTTTTCGGTGTTCCAACTCGCACGATACCACGCGGATTTATCATATGTGGGAATCCGGTTCACTAAGCGTGTGTTCCATTTTTCCATCTCGTATCACAGTCGGCTCTCGTTGCTGCTTCTCCTCCCCCTTCATCGTCTTCATTGGATCTCAGAGCTGCAAAAGTTCCTTTGATTCGGACTTGTCGCCTCCATTTTTGTGGAGTGAGATGGCTGGAGGTGTTATTCAGCAGTTATTAAGGAGGAAACTCCAGTCTCAACCTACTTCCCCTTCCTTTTTGTCATCAATCATCTCAAAGAAAGATGATTATGGATCAACTAGCTCAAGATCCTTGAGAGCACTTGCATTACTTGGAGCTGGCGTCTCTGGGCTCTTGATTTTTACAACAACAGCATATGCTGATGAAGCTGAGCATGGCCTAGAATGTCCAAACTATCCGTGGCCTCACAAGGGCATTCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCATCCTGTCATTCCATGTCTTTGATATCGTACCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAAGGTATGGCTGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGACCGCTTCCCTCAGCCATATGCTAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATCACCAAAGCTCGTCACAATGGTCAGAACTATGTATTTGCCCTCCTAACTGGTTACCATGATCCGCCTGCTGGTGTTTCAATTCGGGAGGGGTTGCACTACAATCCTTATTTTCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGACGGTGCTGTTGAATATGAAGATGGTACTCCTGCTACAGAAGCTCAGATGGGGAAAGATGTTGTGACGTTTTTATCTTGGGCTGCCGAACCAGAGATGGAGGAGAGAAAACTGATGGGTTTCAAGTGGATATTTGTATTATCTTTGGCACTACTTCAAGCTGCATATTACCGTCGCATGAGGTGGTCAGTTCTGAAGTCTCGCAAGCTGGTTCTCGATGTTGTCAACTA 1148 0.4547 MVSVYFLFRCSNSHDTTRIYHMWESGSLSVCSIFPSRITVGSRCCFSSPFIVFIGSQSCKSSFDSDLSPPFLWSEMAGGVIQQLLRRKLQSQPTSPSFLSSIISKKDDYGSTSSRSLRALALLGAGVSGLLIFTTTAYADEAEHGLECPNYPWPHKGILSSYDHASIRRGHQVYTQVCASCHSMSLISYRDLVGVAYTEEEVKGMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYHDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRMRWSVLKSRKLVLDVVN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00330 382 ProSiteProfiles Cytochrome c family profile. 165 272 IPR009056 GO:0009055|GO:0020037
Bva03g00330 382 Gene3D - 142 337 IPR036909 GO:0009055|GO:0020037
Bva03g00330 382 Pfam Cytochrome C1 family 153 369 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PANTHER CYTOCHROME C1 82 382 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 SUPERFAMILY Cytochrome c 146 336 IPR036909 GO:0009055|GO:0020037
Bva03g00330 382 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 82 382 - -
Bva03g00330 382 Gene3D - 338 381 - -
Bva03g00330 382 PRINTS Cytochrome C1 signature 151 170 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 171 190 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 249 273 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 298 317 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 287 298 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 318 337 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 337 352 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 PRINTS Cytochrome C1 signature 216 236 IPR002326 GO:0009055|GO:0020037
Bva03g00330 382 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 337 381 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00330 Bva-Chr3 1948603 1954864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00330 76 382 Chloroplast and Mitochondria Gene Families AT3G27240 85.113 2.16e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00330 K00413 - fve:101298147 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00330 03 1948603 1954864 Bva03g00330 03 1948603 1954864 ECH