Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00327 ATGGAGAATCCTGTTGTGGATTCAAAAAGCGGTTTCAATTCAGCTACCAGAACCTTCCACAGCCTCAGGCCCCCACTCGAACTTCCTCCTCCGAACTCTTCTCTTTCAGTCACAGATTATGTTTTCTCAGTCCTGCGTAACTCGCCGTGGTCTGACTCGGTTGCACTCATCGACTCAGCCACTCGCCAACGAGTTTCCTACTCCGAGTTCACCCACTGGACGCAAACATTAGCCGCCAATCTCAGCTCAGTCGTAGGACTATCCAAAGGAGACACGGCATTCGTATTATCTCCCAATCTCGTCAAGGTGCCGATTCTCTACTTCGCATTATTTTCTCTCGGCGTGGTCGTCTCTCCGGCTAATCCAATCAGTACAGACTCCGAGATTTCCCGCCTCATCAAGCTATGCAAACCAGCTATTGCTTTTGCCACGTCATCGACGGCGTACAAACTCCCCAAGCTTCGTTTAGGAACCATCATTCTCGACTCGCCTGAGTTCGATTCACTCATGACGACCATAACCGCACAGAATAACCTCCCGCTGCCCCGCGCTGAGGTGAGTCAATCCGACGTGGCAGCGATTCTGTACTCGTCGGGCACCACAGGGAAGGTGAAGGGGGTAATGTTAACCCACAGGAATCTGACTGCATCAGCCGCCAGTTACAACGCAACCAGTCCTCAAAGGGAGACGCCGGCGGTGTTTCTATATGCGGTGCCGTATTTTCACGTGTACGGGTTTACTTACTGCCTGAGATCTGTAGTTTTATCGGAAACAGTTGTTTTGATGGAGAGGTATAGTTTGAGGGGGATGTTGAGTGCGGTGGAGGAGTTCAAGGTGACTCACCTTGCTTTGGTCCCGTCATTGGTGTTGGCGATGGTGAAAGACGATTTAACGGACGGCTACGATTTGAGCTCGTTGGAAAGCATCAGTTGTGGCGCTGCTCCTATCGGAAAGGACGTCATCGCGGCTTTCAGTTCCAAGTTCCCTACGGCAGTCATCGCccagGGATACGGGTTGACCGAATCAACGGCATCCGTTTTTCGAGCACTGGGTCCCGCGGAGGCTCGCCGGCCAGGAACAACAGGTAAGCTAATAGCAGGTGTAGAAGTAAAAATTGTAGACCCAAAAACAGGGGAATCCATGCTTCCTGGCGAGCAAGGGGAAATCTGGCTCAGAGGACCTTCGATAATGAAagGCTATGTGGGTGACTCAGAATCAACGAGTTCAACTATGGTAGATGAGTGGTTAAAGACTGGGGACCTTGGTTATATTGACAAGGAAGGTTTCCTATATATTGTGGATAGGTTGAAAGAATTAATCAAATACAAGGCATACCAGGTGGCGCCGGCAGAGCTGGAACAGTTACTCCAGTCTCACCCAGAGATTAACGACGCTGCAGTTATTCCATACCCTGATGCAGAAGCTGGCCAGATACCCATGGCTTGTGTGGTAAGACAACCGCAGAGTTCCCTCGGCGAAGCAGAAATCATTGACTTTATTGCCAGACAGGTGGCACCATACAAGAAAATAAGACGCGTAGCATTTGTTGATTTCATACCAAAGAATACATCTGGCAAAATACTGAGGAAGGACTTAATTAAAATCGTCCTCCAAACACCTTTCTCTAGGATGTA 1634 0.4945 MENPVVDSKSGFNSATRTFHSLRPPLELPPPNSSLSVTDYVFSVLRNSPWSDSVALIDSATRQRVSYSEFTHWTQTLAANLSSVVGLSKGDTAFVLSPNLVKVPILYFALFSLGVVVSPANPISTDSEISRLIKLCKPAIAFATSSTAYKLPKLRLGTIILDSPEFDSLMTTITAQNNLPLPRAEVSQSDVAAILYSSGTTGKVKGVMLTHRNLTASAASYNATSPQRETPAVFLYAVPYFHVYGFTYCLRSVVLSETVVLMERYSLRGMLSAVEEFKVTHLALVPSLVLAMVKDDLTDGYDLSSLESISCGAAPIGKDVIAAFSSKFPTAVIAQGYGLTESTASVFRALGPAEARRPGTTGKLIAGVEVKIVDPKTGESMLPGEQGEIWLRGPSIMKGYVGDSESTSSTMVDEWLKTGDLGYIDKEGFLYIVDRLKELIKYKAYQVAPAELEQLLQSHPEINDAAVIPYPDAEAGQIPMACVVRQPQSSLGEAEIIDFIARQVAPYKKIRRVAFVDFIPKNTSGKILRKDLIKIVLQTPFSRM 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00327 544 CDD 4CL 32 532 - -
Bva03g00327 544 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Bva03g00327 544 Gene3D - 19 437 IPR042099 -
Bva03g00327 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Bva03g00327 544 SUPERFAMILY Acetyl-CoA synthetase-like 30 538 - -
Bva03g00327 544 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Bva03g00327 544 Gene3D - 438 539 IPR045851 -
Bva03g00327 544 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 8 536 - -
Bva03g00327 544 Pfam AMP-binding enzyme 51 442 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00327 Bva-Chr3 1935731 1938951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00327 5 544 Monolignol Biosynthesis Gene Families AT5G63380 49.639 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00327 - - qsu:111992510 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00327 03 1935731 1938951 Bva03g00327 03 1935731 1938951 ECH