Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00326 ATGGAGAATACCAGACATTCCAAACTCGTTTTGGATTCAAAGAGCGGTTTCAATACAGCTACTAGAACCTTCCACAGCCTCAGGCCCCCACTCGAACTTCCTCCTCCGAACGCTTCTCTTTCAGTCGCAGATTATGTTTTCTCAGTCCGGCGCAACTCGCCGTGGTCTGACTCGGTTGCACTCATTGACGCAGCCACTCGCCAACGAGTTTCCTACTCCGAGTTCAACCACTGGACGCAAACATTAGCCGCCAATCTCAGCTCAGTCGTAGGACTATCCAAAGGAGACACGTCATTCGTATTATCTCCCAATCTCGTCAACGTACCGATTCTCTACTTCGCATTACTTTCTCTCGGCGTGGTCGTCTCTCCGGTTAATCCAATCAGCACAGACTCCGAGATTTCCCGCCTCATAGAGCTATGCAAACCAGCGATTGCTTTTGCCACGTCATCGACGGTGCACAAACTCCCCAAGCTTCGTTTGGGAACCATCCTCCTCGACTCGCCTGAGTTCGACTCACTCGTGACGATCAAAACCACGCAGAATAACCTCCCGCTCCCCCGCGCTGAGGTGAGTCAATCCGATGAGGCAGTGATTCTGTACTCGTCGGGGACCACTGGGAAGGTGAAGGGGGCGATGTTGACCCACAGGAATCTTACGGCAACAACCGCCGGTTTCTACGCAACCCGTCTACAGAGGGAGACGCCGGCAGTGGCTCTACATACGATCCCGTATTTTCACGCGTATGGGTTTACTTTCTGTTTGAAATCTGTAGTTTTATCGGAAACGGTGGTGTTGATGGAGAAGTTTAGTTTGAGGGGAATGTTGAGTGCGGTGGAAGAGTTCAAAGTGACTCACCTTGCTGTAGTCCCATCAACGGTTGTGGCGATGATCAAAGACGGTTTAACGGACGGCTACGATTTGCGCTCGTTGGAAGGCGTTGGTTGTGGCGGAGCTCCTTTGGGAAAGGACGTTATCGCGGCTTTCCGTTCCAAGTTCCCCACAGTCGTGCTTGCCCagGGATAcgggttgaccgaagcaacaTCGACCGTTTCTCGATTAATGGGTCCCGTGGAGGTTCGCCAGCCAGGAACAACGGGTAAGCTAATGTCATGTTTAGAAGCAAAAATCGTAGATCCGCACACAGGGGAATTCATGCTTCCTGGTGAACAAGGGGAAATCTGGCTCAGAGGACCTTCAATAATGAAagGCTATGTGGGTGATTCAGAAGCAAATAGTGCAACCTTTGTAGGTGAGTGGTTAAAGACTGGGGACCTTGGTTATATTGACAAGGAAGGTTTCCTATATATTGTGGATAGATTGAAAGAATTGATCAAATACAAGGCATACCAGGTGGCGCCTGCAGAGCTGGAACAATTACTCCAGTCCCACCCAGAGATAATCGACGCTGCAGTTATTCCATACCCTGATCCAGAAGCCGGCCAGATACCTATGGCTTGTGTGGTGAGACGGCCACAAAGTTCGCTTGGCGAGGCAGAAGTCATTGATTTTATTGCCGAAAAGGTGGCACCATACAAGAAAATAAGGCGTGTGGCCTTTGTTGATTCCATACCGAAGAATGCATCAGGCAAAATACTGAGGAAGGACTTGACTAAAATCGTCCTCCAAACACCTTTCTCTAGGTTGTA 1649 0.4924 MENTRHSKLVLDSKSGFNTATRTFHSLRPPLELPPPNASLSVADYVFSVRRNSPWSDSVALIDAATRQRVSYSEFNHWTQTLAANLSSVVGLSKGDTSFVLSPNLVNVPILYFALLSLGVVVSPVNPISTDSEISRLIELCKPAIAFATSSTVHKLPKLRLGTILLDSPEFDSLVTIKTTQNNLPLPRAEVSQSDEAVILYSSGTTGKVKGAMLTHRNLTATTAGFYATRLQRETPAVALHTIPYFHAYGFTFCLKSVVLSETVVLMEKFSLRGMLSAVEEFKVTHLAVVPSTVVAMIKDGLTDGYDLRSLEGVGCGGAPLGKDVIAAFRSKFPTVVLAQGYGLTEATSTVSRLMGPVEVRQPGTTGKLMSCLEAKIVDPHTGEFMLPGEQGEIWLRGPSIMKGYVGDSEANSATFVGEWLKTGDLGYIDKEGFLYIVDRLKELIKYKAYQVAPAELEQLLQSHPEIIDAAVIPYPDPEAGQIPMACVVRRPQSSLGEAEVIDFIAEKVAPYKKIRRVAFVDSIPKNASGKILRKDLTKIVLQTPFSRL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00326 549 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Bva03g00326 549 Gene3D - 443 544 IPR045851 -
Bva03g00326 549 CDD 4CL 39 537 - -
Bva03g00326 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 541 - -
Bva03g00326 549 Gene3D - 25 442 IPR042099 -
Bva03g00326 549 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 12 541 - -
Bva03g00326 549 SUPERFAMILY Acetyl-CoA synthetase-like 43 543 - -
Bva03g00326 549 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Bva03g00326 549 Pfam AMP-binding enzyme 55 447 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00326 Bva-Chr3 1931238 1933855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00326 1 549 Monolignol Biosynthesis Gene Families AT5G63380 49.556 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00326 - - qsu:111992510 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00326 03 1931238 1933855 Bva03g00326 03 1931238 1933855 ECH
Bva03g00326 03 1931238 1933855 Bva04g01815 04 18935887 18938213 ECH