Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00316 ATGCTCCAATGCCACTGCCTATTTCCACTTCCCAAGCCATTTCACGAATCTGCAGACTGCGGCTCCGCTCAGACCCAAGTCTTGTTGCAGCTAAGGAAGCATCTGGAGTACCCTGCCTCTTTGGACATTTGGGGAAATTATAACGTTGACTTCTGCAACCTTTCTTCATCAGCTTACATGAGCGTTAAATGTCAGGATAATTCGGTAACCGAGCTTAAAATTATGGGAGACAAGTCTGTCAAGGTTAACAGCTTCAATGGATTTGCAATTCCCAACCAAACGCTCTCCGCCAGCTTCTCTATTGATTCTTTTGTTACCACATTGACAAGGTTAACCAACTTAAGAGTTCTTAGCTTGGTATCCTTGGGAATTTGGGGGCCACTTCCTGATAAGATTCATCGATTATCTTTTCTTGAAGTTCTGGACTTGAGCTCAAATTTCTTGTTCGATTCCGTTCCAGAAAAAATATCCACAATGGTAAAACTTCAAACACTAAAACTTGatgacaattattttaatagcaGTATGCCAGATTGGTTTAATTCATTGTCTAATCTAAATGTATTGAGTTTGAAGAGCAACCGCTTAAAGGGTTCATTCCCCTCCTCACTGTGCAGAATTAAGACCCTCACTGATATTTCCTTGTCTCACAATGAGCTTTCTGGTGGATTGCCTAATCTGAGTGGTTTCACTGGCCTACATGTTCTCAATCTAAGAGAAAACCATTTAGATTCTGAACTACCATTAATGCCCAAGGGTGTAGTTACAGTTCTTCTTAGCCAAAATGAATTCTCAGGTCAGATACCGAAGCAGTTTGGTGAACTGGGTCAGCTTCAACATCTAGATCTTTCATCAAATCATCTGAGTGGAATCCCTCCATCTACCTTGTTCGTTTTGTCAAACCTCAGTTATTTGAATTTAGCAAGCAATATGTTGAGTGGGTCACTTCCAGACGAACTAAGTTGTAGCAGCAAACTTGGATTTATAGATATTTCTAGTAACAAGTTAAATGGTGGACTTCCTTCTTGCTTGGTCAACACTTCTGATGGAAGAGTAGTTAAATATGGTGGAAATTGTTTATCTATTGATTCTCAACATCAGCATCGACGTTCGTATTGTAAGGAATCCAGTACTGGGTGGAAGAAATCTAGGACTGGGAAAATAGTAGCAGTAGGGGCCATTATTATTGGACTTGTTCTTGTACTTGCGCTTTCGGTGTTTGGAGTCCTCTATTGTAGAAGATATCATTCGAGAAAGACAACTGAGCAGTGTCTGTTGGCAAAAATTAGGCAAGATAATTCCACAACTGGGATTTCCTCTGAACTCCTTGCTAATGCCAGATTGATTTCGCAATCAATGAAGCTAGGGACACACACTAATCCAATTTGCCGACTGTTTTCAATTGAAGAGTTGAAGGAAGCTACAAAAGACTTCCATACCTCATTGTTTATTGGTGAAGGCTCTATAGGGAAGCTGTACAAAGGTAAACTGGAGAACGGATCTTACGTGGCGATTAGATCTTTGCCTTTGTCGAAGAAATACTTGATTCAAAATCTCAAAGCTCGGCTAGATTTTCTCTCAAAGCTTCACCATCCAAATTTGGTTGCACTCTTGGGTCATTGCATTGATAGTAGTGAAGATGACTCTAGTACTCACAAAGTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCGTGCTCATCTATCAGAATTTTCTCCAGATAAGGCCCTTAAATGGTCTGATAGATTGGCAGTTTTAATTGGAGTTGCCAAAGCTGTGGATTTTTTACACAGTGGGGTTATTCCCGGTTGTTTTAATAACCAATTGAGGACAAACAATATCTTGCTTGATGAGCATCACATTCCGAAACTAAGTGACTATGGGATGTCCATCATCAGAGAAGAAATCGAAAAGCCTGAGGCAAAGGGAGATGGCCCAAAATCATGCCATGGGAGAAAGTTAGACGCTGATGTTTATAATTTCGGGTTCATATTGTTTGAATCACTAGTTGGACCTATAGCAAACGATAAAAGAGACGCATTTTTCCTAAATGAAAAGGCCTCGTTTGACAGTCAAGATGGTAGAAAGAAAATCGTAGATCCAGTAGTGTTATCCACTTGTAGTCAAGAGTCATTATCAATTGCAGTCTCCATAACAACAAAATGCATATCTCCAGAACCATCGTCTCGTCCCTCTTTTGAAGATGTCCTATGGAACTTAAACTATGCAGCTCAAGTCCAGGCCACAGCAGAGGCTGAACAGAAATCTGATTCTACATCAATATCATTGTCATA 2300 0.3987 MLQCHCLFPLPKPFHESADCGSAQTQVLLQLRKHLEYPASLDIWGNYNVDFCNLSSSAYMSVKCQDNSVTELKIMGDKSVKVNSFNGFAIPNQTLSASFSIDSFVTTLTRLTNLRVLSLVSLGIWGPLPDKIHRLSFLEVLDLSSNFLFDSVPEKISTMVKLQTLKLDDNYFNSSMPDWFNSLSNLNVLSLKSNRLKGSFPSSLCRIKTLTDISLSHNELSGGLPNLSGFTGLHVLNLRENHLDSELPLMPKGVVTVLLSQNEFSGQIPKQFGELGQLQHLDLSSNHLSGIPPSTLFVLSNLSYLNLASNMLSGSLPDELSCSSKLGFIDISSNKLNGGLPSCLVNTSDGRVVKYGGNCLSIDSQHQHRRSYCKESSTGWKKSRTGKIVAVGAIIIGLVLVLALSVFGVLYCRRYHSRKTTEQCLLAKIRQDNSTTGISSELLANARLISQSMKLGTHTNPICRLFSIEELKEATKDFHTSLFIGEGSIGKLYKGKLENGSYVAIRSLPLSKKYLIQNLKARLDFLSKLHHPNLVALLGHCIDSSEDDSSTHKVHLVYEYVPNGNYRAHLSEFSPDKALKWSDRLAVLIGVAKAVDFLHSGVIPGCFNNQLRTNNILLDEHHIPKLSDYGMSIIREEIEKPEAKGDGPKSCHGRKLDADVYNFGFILFESLVGPIANDKRDAFFLNEKASFDSQDGRKKIVDPVVLSTCSQESLSIAVSITTKCISPEPSSRPSFEDVLWNLNYAAQVQATAEAEQKSDSTSISLS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00316 766 Gene3D Ribonuclease Inhibitor 20 253 IPR032675 -
Bva03g00316 766 PANTHER OS07G0166700 PROTEIN 19 761 IPR045272 GO:0004714|GO:0006468
Bva03g00316 766 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 19 761 - -
Bva03g00316 766 SUPERFAMILY L domain-like 20 360 - -
Bva03g00316 766 Gene3D Phosphorylase Kinase; domain 1 439 560 - -
Bva03g00316 766 Pfam Protein tyrosine and serine/threonine kinase 484 740 IPR001245 GO:0004672|GO:0006468
Bva03g00316 766 Gene3D Ribonuclease Inhibitor 254 382 IPR032675 -
Bva03g00316 766 Gene3D Transferase(Phosphotransferase) domain 1 561 765 - -
Bva03g00316 766 ProSiteProfiles Protein kinase domain profile. 478 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00316 766 PRINTS Leucine-rich repeat signature 299 312 - -
Bva03g00316 766 PRINTS Leucine-rich repeat signature 278 291 - -
Bva03g00316 766 SMART LRR_typ_2 135 158 IPR003591 -
Bva03g00316 766 SMART LRR_typ_2 299 323 IPR003591 -
Bva03g00316 766 SMART LRR_typ_2 159 182 IPR003591 -
Bva03g00316 766 SMART LRR_typ_2 275 298 IPR003591 -
Bva03g00316 766 SMART LRR_typ_2 183 207 IPR003591 -
Bva03g00316 766 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Bva03g00316 766 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Bva03g00316 766 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Bva03g00316 766 SUPERFAMILY Protein kinase-like (PK-like) 458 742 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00316 Bva-Chr3 1880114 1884735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00316 22 690 Miscellaneous Gene Families AT5G14210 58.702 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bva03g00316 PK_Tyr_Ser-Thr 9.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00316 - - gmx:100799183 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00316 03 1880114 1884735 Bva03g00316 03 1880114 1884735 ECH
Bva03g00316 03 1880114 1884735 Bva04g01824 04 18987601 18992360 ECH