Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00312 ATGGGCAAAGCAGAAATGATCAGTAAGCTCCACCTGAGAGGTTTGGTCTTATTCCTCTGGCTCTTTGTCTGCTCACTTGGAAAAGACCTGCTTAGCTGCGACACAACGTCCCCAGTTGCCTCTGGGTACCGTTGCGATAGAGAAGGATCTCAGAGCCAATGTGGGTCATTTGCAGTTATTCACACTAATTCATTCTACTCGTCTCTCTTCAATTTGAGCTTTTACTTGGGACTCAATCGCTTTGTGATTGCAGAAGCAAATGGTTTTTCTGCAGAAACAGAGTTCCTTCCCCAGAATCAACCTCTGTTAATTCCAATTGATTGTAAGTGCAACGGTAGCTTCTTTGAGGCTCAATTGACCAAAACCAGCATTAAAGGAGAGAGCTTTTTTGGCATTGCTAAATCACTCGAGGGCTTGACGACCTGCAAGGCTATTCAGGATAAGAACCCAGATGTGCCACCTTGGGATCTTGCTGATAAAACCCATTTGCTTATCCCCTTGAGGGATAAAGTTTCTAACTTGGCGTCTAATTTCAATACCACCGTAGAAGCTATCATTTCTGCCAATAACATATCCTCAGAAGCTTTTGATCCTGAAAAACTTGAACCCTTTTCCTCTCTTCTGATTCCACTCATTGGGGAGCCCAATCTTGGTGCTCTGGTTAAACCCAGTGAACCCAATTCAGGTTTCCCAAATACCAGCATCCCTGTGATTAGACCACATAAGAAGTCCATGTGGAAGACCGAATTGTGCATTGGGTTAGCTGGGGTTGCAGCTGGAATCTGCATAGCTGTTGCAGGAGCCTTCTTTCTGATCCATTTCAGAAaccagaagaagaaagagagtgCATCAAAAGGAGGCGATATGGAACTACAGCATCTTAATCTCAGTGTGAGAACAACCAGTGACAAGAAAGTTTCTTTTGAGGGATCCCAGGAAGCTCTCGATAGGAAAATGACTGATGCTATTAGTATTACTACGCCACGAAAGATGATGATGGATATATACAATATTGAGGAAATGAGAAAGGCCAGTGAGGACTTCAATTCGAGCAACCACATTGAAGGGTCTGTTTTTCACGGTCGCCTAAATGGGAAGAACATGGCAATCAAGCGCATAAAGACGGGGGCAGTGTCAAAGATAGATTTTGGGCTCTTCCATGATGCACGTCACCACCACCCCAACATACTTAAATTGCTCGGAACCTGTTTGACAGATGGTCCTGAGTCATTTCTGGTTCTTGAGTATGCCAAAAATGGGACTTTGAAAGATTGGCTTCACGGTGGCTTGGCAATAAAGAACCAGTTCATTGCTTCCTGCTACTGTTTCCTAACTTGGAACCAGAGACTGAGGATCTGCCTTGATGTTGCCATGGCCCTGCAGTATATGCATCATGTCATGAATCCAAGTTATGTGCACAGAAACGTCAAGAGCAGGAACATCTTTTTAGACGAAGAACTGGGTGCCAAGATAGGCAATTTTGGAATGGCAGAGTGCATTGAAAATGACACTGAGGACCCACATTTCTACTCAACCAACCCTGCCTCTTGGAGCCTGGGCTATTTGGCTCCTGAATATGTTCACCAAGGTATAATTTCCCCAAGCGTTGATATCTATGCTTATGGTGTGGTTCTGCTTGAAGTTCTATCTGGGCAAACAGCCATAAGCAGACCCAATGAGAAGGGGGAAGGCAGCGTTTGGCTCacagaaaaaatcaaatctattTTGAAGTCTGAGAATGTGGATGAACTGAGGGAGTGGATGGACAGTGCACTGGGGGAGAACTATTCATTTGATGGAGCAGTCACAGTGGCCAATGTTGCAAGAGCTTGTGTGGAGgaagatttttctttgagaCCAAGTGCCGTAGAAGTTGTTGACAAGCTATCAAGATTGGTGGAGGAATTGCCACAAGAGGATCAAATGTTATTAAGTGAAAGCTCAAGCAAACCTCTGGTGAAGGCAGCACCAAGCAACccata 1982 0.4354 MGKAEMISKLHLRGLVLFLWLFVCSLGKDLLSCDTTSPVASGYRCDREGSQSQCGSFAVIHTNSFYSSLFNLSFYLGLNRFVIAEANGFSAETEFLPQNQPLLIPIDCKCNGSFFEAQLTKTSIKGESFFGIAKSLEGLTTCKAIQDKNPDVPPWDLADKTHLLIPLRDKVSNLASNFNTTVEAIISANNISSEAFDPEKLEPFSSLLIPLIGEPNLGALVKPSEPNSGFPNTSIPVIRPHKKSMWKTELCIGLAGVAAGICIAVAGAFFLIHFRNQKKKESASKGGDMELQHLNLSVRTTSDKKVSFEGSQEALDRKMTDAISITTPRKMMMDIYNIEEMRKASEDFNSSNHIEGSVFHGRLNGKNMAIKRIKTGAVSKIDFGLFHDARHHHPNILKLLGTCLTDGPESFLVLEYAKNGTLKDWLHGGLAIKNQFIASCYCFLTWNQRLRICLDVAMALQYMHHVMNPSYVHRNVKSRNIFLDEELGAKIGNFGMAECIENDTEDPHFYSTNPASWSLGYLAPEYVHQGIISPSVDIYAYGVVLLEVLSGQTAISRPNEKGEGSVWLTEKIKSILKSENVDELREWMDSALGENYSFDGAVTVANVARACVEEDFSLRPSAVEVVDKLSRLVEELPQEDQMLLSESSSKPLVKAAPSNP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00312 660 Gene3D Transferase(Phosphotransferase) domain 1 417 650 - -
Bva03g00312 660 MobiDBLite consensus disorder prediction 641 660 - -
Bva03g00312 660 Pfam LysM domain 170 210 IPR018392 -
Bva03g00312 660 Gene3D Phosphorylase Kinase; domain 1 321 416 - -
Bva03g00312 660 SUPERFAMILY Protein kinase-like (PK-like) 337 629 IPR011009 -
Bva03g00312 660 MobiDBLite consensus disorder prediction 640 660 - -
Bva03g00312 660 ProSiteProfiles LysM domain profile. 160 209 IPR018392 -
Bva03g00312 660 Pfam Protein kinase domain 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00312 660 ProSiteProfiles Protein kinase domain profile. 344 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00312 660 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 657 - -
Bva03g00312 660 PANTHER PROTEIN LYK2 6 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00312 Bva-Chr3 1862501 1864554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00312 42 656 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 38.880 5.20e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva03g00312 Pkinase 7.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00312 - - gmx:100816082 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00312 03 1862501 1864554 Bva03g00312 03 1862501 1864554 ECH