Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00298 ATGGAAATTGGTAGCCCCGGAATTGGAAATGCAAAGTCGCCTTCAAGTAAAGAGGAAGTCAACCCTGATGTTTGCGCAAATGGATTCTTTACTGCCAGAGCAAAATTGGAAATGGAAGCAAGGCAAAGGTTTTATGTTGGGAGGTCCTATGGCACTTCTCGACGTGGCCTCCATGGTAATTTTGTTCCCCCTGTCAAATCCAATGGGAATAACGTTGGAAATATGACTTCACGAAATTCTGGAAAATGTGGTGATGCTATGGATGACTCAACAAAGAGATGtttggAAATGCTATGTGGCCCTGATTGTGAGCTTCCTGAGAAATTGAGGAACTTAGAGCCGCTTATTGAACATGTTAGTAACGAGATTATGGATAGAGATCCCAATGTTCGGTGGGATGACATTGTGGGGTTGGAGCATGCAAAGAAATGTGATACTAAGATGGTTATATGGCCTCTGCTACGCCCTGACATATTGAAGGGATGTCGTTCTCCTGGGAGAGGTCTGCTTCTTTTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCAGGGAAGGCGAAggcaacctttttttttatatcagcGAGTTCCCTGACAAGCAAGTGGATTGGTGAGGGTGAAAAGCTAGTGAGAGCCTTTTTTGGAGTTGCCAGTTCTCGTCAGCCAGCagtaatttttgttgatgaaattGATTCCCTCCTGTCCCAGCGTAAATCAGAGGGTGAACATGAATCAAGTAGACGACTGAAGACGCAGTTTCTTATTGAAATGGAGGGTTTTGTCAGCGGGGCAGCAAACCGTCCTCAGGAGCTTGATGAAGCAGCACGAAGGCCACTTACCAAAAGACTCTATATTCCCCTACCATCCTCAGAGGCTAGAGCATGGATTGTGCGTAACCTCTTAGAAAAGGATGGATTATTCAAGCTGTCAAAGGAGGAAATTGATATCATATGCAACCTAACTGAAGGTTATTCCGGATCAGACAGGAAAACTTA 1007 0.429 MEIGSPGIGNAKSPSSKEEVNPDVCANGFFTARAKLEMEARQRFYVGRSYGTSRRGLHGNFVPPVKSNGNNVGNMTSRNSGKCGDAMDDSTKRCLEMLCGPDCELPEKLRNLEPLIEHVSNEIMDRDPNVRWDDIVGLEHAKKCDTKMVIWPLLRPDILKGCRSPGRGLLLFGPPGTGKTMIGKAIAGKAKATFFFISASSLTSKWIGEGEKLVRAFFGVASSRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFVSGAANRPQELDEAARRPLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSKEEIDIICNLTEGYSGSDRKT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00298 335 Pfam ATPase family associated with various cellular activities (AAA) 169 290 IPR003959 GO:0005524|GO:0016887
Bva03g00298 335 CDD AAA 162 287 - -
Bva03g00298 335 PANTHER FIDGETIN-LIKE PROTEIN 1 10 334 - -
Bva03g00298 335 MobiDBLite consensus disorder prediction 1 20 - -
Bva03g00298 335 MobiDBLite consensus disorder prediction 57 76 - -
Bva03g00298 335 SMART AAA_5 165 293 IPR003593 -
Bva03g00298 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 332 IPR027417 -
Bva03g00298 335 PANTHER AAA DOMAIN-CONTAINING 10 334 - -
Bva03g00298 335 Gene3D - 128 291 IPR027417 -
Bva03g00298 335 Gene3D - 292 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00298 Bva-Chr3 1792159 1795463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00298 122 332 Calmodulin-binding Proteins AT3G56690 36.771 1.70e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00298 K22766 - qsu:112005212 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00298 03 1792159 1795463 Bva03g00298 03 1792159 1795463 ECH