Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00279 ATGGAAAACTATCCTATGTTGTTtccaatttcaaattcaagtaCTGCTATGGGAAGctctcatcatcatcaagGGTTGATCAGTAATTTTGATGGTCAGAGCTCAAATGGGTTCTTGGGTTTGAAGAGCACTAGCACTAGCACTAGCGCTCATGATGATCAGAATAATCTTCATCAGTTGCAGAAAAGAGTTGCAGAAACTGCTAGAGATAACCATGGATTATTATCTCGAGGGGGAAGCATTGTGACTGagaatcatcatcatcagatTGGTGATTCTGCGGGTAAAAAGAAAGGTGAGAAGAAGGTTAGAAAGCCTAGATATGCTTTTCAAACGAGGAGCCAAGTGGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAAGCTGTTAAGAACAACAAATTCCCCAgGAGCTATTACCGGTGCACATACCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACCAAAGACGAGGGTGTGGTGGTGACTACTTACGAGGGAGTCCACAATCACCCAATTGAGAAGACAAGTGATAATTTTGAGCACATCTTGAGTCAGATGCAAATATACAGTACTCCCTTTTG 599 0.3873 MENYPMLFPISNSSTAMGSSHHHQGLISNFDGQSSNGFLGLKSTSTSTSAHDDQNNLHQLQKRVAETARDNHGLLSRGGSIVTENHHHQIGDSAGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTKDEGVVVTTYEGVHNHPIEKTSDNFEHILSQMQIYSTPF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00279 199 SUPERFAMILY WRKY DNA-binding domain 111 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g00279 199 ProSiteProfiles WRKY domain profile. 114 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g00279 199 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 66 194 - -
Bva03g00279 199 MobiDBLite consensus disorder prediction 85 104 - -
Bva03g00279 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 194 IPR044810 GO:0003700
Bva03g00279 199 Pfam WRKY DNA -binding domain 120 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g00279 199 Gene3D WRKY domain 103 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g00279 199 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00279 Bva-Chr3 1698885 1700839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00279 107 197 WRKY Transcription Factor Family AT5G13080 89.011 1.15e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva03g00279 WRKY 3.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00279 - - ccaj:109792402 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00279 03 1698885 1700839 Bva03g00279 03 1698885 1700839 ECH