Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00274 ATGGATCCCAAGGGCTCAAAGCAAGTAGCCAACTTGTTGAGTCTCTCCCAGGCACGGGTACAGGCAGAATCACAAGCGAACATGGGAGAGAACAAACCAGCAGAAATCAAGGATTTCCAGATTGTGGTTGCAGATaaagaagagaacaagaagCAGTTAGCCCCTAAGAGGACTTCGAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGAAGGAGGATAAGGATGCCAGCTCTATGTGCAGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCGGATGGGGAAACTATACAGTGGTTATTGCAGCAAGCGGAGCCATCGATAATCGCAGCTACTGGGACAGGTACAATACCGGCATCAGCTCTAGCTGCTGCTGGTGGCTCTGTTTCTCCACAGGGAACCTCTCTATCTGCAGGATTGCATCAAAAAATCGATGAATTAGGAGGGTCCAATATTGGGTCAGCGAGTAGGACCAGCTGGGCAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACTGGTCTATGGCCCCCCGTCACTGGATTTGGGTTTCAGTCATCATCTGCACCATCTACAACAAATTTAGCCACTGAGAGCTCAAATTACCTCCAAAAAATTGCCTTCCCTGGCTATGACTTGCCCGCAACCAACATGGGTCCTATGAGTTTCACCTCAATTCTTGGTGGGGCTAACCAGCAGATGCCCGGTTTAGAGCTTGGCTTGTCTCAAGATGGTCACATAGGGGTTTTGAACCCACAAGCCTTGACGCAGATTTATCAGCAGATGGGTCAAGCCAGAATgcaacagcaacagcaacagcagcaTCAGCATCAGTCTTCTGCCAAGGATGATTCTCAAGGCTCAGGGCAACATGAAGAAATAGATAACTCAGAGAATTCAATAGGAACTGGATTTGGTTTGCCTGCTCCTTCTTATTCCTTCACCGCAGTACTCAAGTCTCCAGAAACAGGTGGATTTGCACGGCCAGATAGCTTGGGTTTGGGCTTAAACTCTTGTTTAATTCAGAGGCCCTACTATACTTTTCTTCGTcgcacctttttttttttctcccctctTCTTATTCTCGCTGTGGGCATTCCCTGGTTGTTGGAGGGGAGAGAAATGGATGATGAATATGCAAAACTTATCAGGAGGATGAACGCCCCAAGGGTTGTGATTGACAACGATTCCTGCGAAGATGCTACTGTTGTCCGGGTTGACTGTGTTAACAAACATGGGATTCTCCTGGATGTTGTCCAAGTTTTCACGGATATCAAccttataataagaaaagcCTACATTTCATCTGATGGGGTGTGGTTCATGGAtgTGTTCAATGTGATTGATTGCAATGGAAACAAAATCAGAGATAAGGAAGTCATTGATTATATACAGAGGaaacttgaaaataatCCCAGCTTTGCACCCTCAATGAGAGGAACTGTTGGGGTTGTTCCTTCTGAAGAGTACACATCAATTGAACTAACGGGTACAGACAGGCCTGGTTTACTGTCAGAAGTATGTGCAGTTCTTACAGACCTTCATTGTAATGTTGTAAATGCTGAGGTATGGACACATAATACTAGGGCTGCTGCAGTAGTTCATGTGACAGATGATGCCAGTGGATGTGCCATCAAGGATCCATCCCGTCTCCTTACAATAAAGGAGTCCCTTTGCAATGTCCTTGGGGGAAACAATGATCCAAAGGCAGCAAAAACGACAGTTTCACCACCTGGAGTTACAAATAGGGACAGAAGGTTACATCAGATAATGTTTGCTGACAGGGACTATGAAAAGGTTGAAAGAGCAGGACAATGGGGAATCGGAGATAAGATTACATTCCCTCACGTAACTGTGTTAGATTGTATTGAGAAAGACTACACTGTGATTACCATGAGGGCGAAAGATCGGCCAAAACTGCTATTTGATATTGTTTGTACATTAACAGACATGGAGTACGTAGTTTTTCATGGTGTGGTCCGTACAGAGAGGACAGAAGCTTATCAGGAATTTTATATTCGACATGTTGATGGGCTCCCCATAAGCTCTGAAGCTGAACGAGAACGTCTTGTACAGTGTCTTAAAGCAGCCATTGAAAGGCGGGCATCTGAGGGGATGGAACTAGAATTGTACGCAGAAGATCGTGTTGGACTCCTCACAGACATCACAAGGATATTCAGAGAGAACAGTTTATGTATCAAAAGAGCAGAAATATCAACACAAGGTGGAAAGGCAAAAGACACTTTCTATGTTACTGATGTATCAGGCAACCCAGTTGATCCCAATATTATTGATTCAATACGCAGACAGATTGGCCATACAACATTGCAGGTCAAACACAACTCAAGTCTTTCGCCAAAGCCCACTCAAGGCTCAACTATGGGTTTCCTCTTTGGAAATTTCTTTAAAGCTCGATCTTTTCAGAATTTTAAGTTGATCAGATCTTATTCTTA 2465 0.4304 MDPKGSKQVANLLSLSQARVQAESQANMGENKPAEIKDFQIVVADKEENKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSPQGTSLSAGLHQKIDELGGSNIGSASRTSWAMVGGNLGRPHVATGLWPPVTGFGFQSSSAPSTTNLATESSNYLQKIAFPGYDLPATNMGPMSFTSILGGANQQMPGLELGLSQDGHIGVLNPQALTQIYQQMGQARMQQQQQQQHQHQSSAKDDSQGSGQHEEIDNSENSIGTGFGLPAPSYSFTAVLKSPETGGFARPDSLGLGLNSCLIQRPYYTFLRRTFFFFSPLLILAVGIPWLLEGREMDDEYAKLIRRMNAPRVVIDNDSCEDATVVRVDCVNKHGILLDVVQVFTDINLIIRKAYISSDGVWFMDVFNVIDCNGNKIRDKEVIDYIQRKLENNPSFAPSMRGTVGVVPSEEYTSIELTGTDRPGLLSEVCAVLTDLHCNVVNAEVWTHNTRAAAVVHVTDDASGCAIKDPSRLLTIKESLCNVLGGNNDPKAAKTTVSPPGVTNRDRRLHQIMFADRDYEKVERAGQWGIGDKITFPHVTVLDCIEKDYTVITMRAKDRPKLLFDIVCTLTDMEYVVFHGVVRTERTEAYQEFYIRHVDGLPISSEAERERLVQCLKAAIERRASEGMELELYAEDRVGLLTDITRIFRENSLCIKRAEISTQGGKAKDTFYVTDVSGNPVDPNIIDSIRRQIGHTTLQVKHNSSLSPKPTQGSTMGFLFGNFFKARSFQNFKLIRSYS 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00274 821 Pfam TCP family transcription factor 58 244 IPR017887 -
Bva03g00274 821 SUPERFAMILY ACT-like 402 473 IPR045865 -
Bva03g00274 821 ProSiteProfiles ACT domain profile. 711 790 IPR002912 -
Bva03g00274 821 MobiDBLite consensus disorder prediction 47 68 - -
Bva03g00274 821 ProSiteProfiles TCP domain profile. 60 114 IPR017887 -
Bva03g00274 821 CDD ACT_ACR_3 631 705 - -
Bva03g00274 821 SUPERFAMILY ACT-like 491 551 IPR045865 -
Bva03g00274 821 Gene3D - 491 565 - -
Bva03g00274 821 ProSiteProfiles ACT domain profile. 496 582 IPR002912 -
Bva03g00274 821 CDD ACT_ACR_4 709 780 - -
Bva03g00274 821 SUPERFAMILY ACT-like 707 776 IPR045865 -
Bva03g00274 821 CDD ACT_ACR_2 495 568 - -
Bva03g00274 821 Pfam ACT domain 495 544 IPR002912 -
Bva03g00274 821 MobiDBLite consensus disorder prediction 265 289 - -
Bva03g00274 821 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 379 813 - -
Bva03g00274 821 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 379 813 IPR040217 -
Bva03g00274 821 MobiDBLite consensus disorder prediction 265 306 - -
Bva03g00274 821 ProSiteProfiles ACT domain profile. 407 491 IPR002912 -
Bva03g00274 821 Gene3D - 709 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00274 Bva-Chr3 1653417 1664789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00274 1 294 TCP Transcription Factor Family AT3G27010 58.824 3.95e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva03g00274 TCP 9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00274 - - gmx:100818506 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00274 03 1653417 1664789 Bva03g00274 03 1653417 1664789 ECH