Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00266 atgatCAATTCACTTTGTGGAAGCTCAGTGTCCCTCGTGAGTGAGAAATCCACTTGTTCAAATAAGAAAAGTGGGAGTGAGTCCTCTGATTTAGAGCAGAGTAGTCTAACCCCACCAAGCTTAAGCCTTCCTTCTCTGAAATTTGACTTGGACGGAGATGTTGAAGTTCAGTCCCCGGACAGTTCATTATGGGAATCCTTTTTCTCCGATCAGTTAGAGGGCGATTTCATGATTGCATCGCCCGTGAGGAACTTGGCTTCTCCACAAGCTTCAACCTACAATTGCAACTACAATTATGCTCAAGCAATGCAAGGGCAGAGTCTTTCTGGGTGTTCGCCACCTCGCTTCTCTTCCCATATTGGATCGTTTGGCAGCAGCCAGAAAGGGAAGGGATTGAGTCCACTTCAGAGGGTATTCAACTCTCTAAATAATCAGTGCATGCAACCTGTGGAAAATCTTTCATTGCCAGCCATTGAAGAATTCTTGGAAGATTATCAAGCTGCAGGGGATGGGTTTGGAGTTGGAGTTGGAGTTGGAGTCGGAGGAGGAGGCTACTCTTCGACCAAAGTGTCTGATATAGCGACCTCGTCGGAGTGCTTTGACTTGCAGAATTCAATCCCAGCCATGTTGGATGGCTTGGCAATGACTAACTCGTCGACAAGATTTTGTGGATCAGTGAATGATGAATCTACTTCGGGTGCTTCTCAACTGTCCCAAGAGAGTGATCTGTATCAGATGGCGTCTATTGCCACTGCATCTCTGTCACAAGCTTTGCAACAAGAACGCCGGCACGAGAAGCACCACAAGCAGCACTCACAACAGCAACAACAATCACATGCACACCCAAATCCACATGGTTTGATGGTGCCTCTACCTATTGCCTCCGAGCAGCAAGAGCAAGACAGCGGGCTTCAACTGGTGCATCTGCTTCTGGCATGTGCTGAAGCAGTGGCCAAAGAAGAATATATGCTGGCAAGAAGGTACCTGCACCATCTCAACCGTGTTGTGACCCCTCTTGGTGATTCCATGCAACGCGTTGCTTCCTGTTTCACGGAAGCCTTGAGCGCAAGATTAGCAGCAACTCTTACCACCACCTCCAATCCCAAACCGTCTTCATCTGCTTTTCCACCTAACTCCATAGAAATCCTCAAAATTTACCAGATTGTCTACCAAGCTTGTCCTTACATAAAATTCGCCCATTTCACCTCCAACCAAGCCATCTTCGAAGCCTTTGAAGCCGAAGAGCGCGTCCACGTCATCGACCTAGACATCCTTCAAGGCTATCAATGGCCAGCTTTCATGCAAGCCTTAGCGGCCCGACCCGATGGAGCCCCGTTTCTCCGAATCACTGGTGTCGGACCGTCAATAGAGTCCGTAAGGGAAACGGGACGGTGTCTGACAGAATTGGCTCATTCTCTTCACATCCCATTTGAGTTCCACCCAGTTGGGGAGCAACTGGAAGACCTGAAGCCCCACATGTTCAACCGGCGGATTGGGGAGGCGTTGGCGGTGAACTCGGTAAACCAGCTCCACCGGGTACCCGGGAACTGCCTTGGAAACTTGATATCAATGATAAGAGACCAAGCTCCGAACATAGTGACCCTTGTGGAGCAAGAAGCCAGCCACAACGGGCCATATTTTCTAGGGAGATTTCTAGAGGCTTTACACTATTACTCAGCtatatttgattctttggATGCCACATTTCCGCCGGAGTCTCAGCAGCGGGCGAAGGTGGAGCAATATATATTTGCACCGGAGATAAGGAACATAGTGGCGTGTGAAGGAGCAGAGAGGGTAGAGAGGCACGAGAGGTTGGAGAAATGGAGGAAGATCATGGAGGGGAAAGGATTCAAAGGGGTGCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGGTTGTATTCATGTGATGGGTATAGGTTGACGGAGGACAAGGGTTGCTTGCTATTGGGTTGGCAAGATAGGGCCATTATTGCTGCTTCTGCATGGCGCTGCTG 2009 0.4908 MINSLCGSSVSLVSEKSTCSNKKSGSESSDLEQSSLTPPSLSLPSLKFDLDGDVEVQSPDSSLWESFFSDQLEGDFMIASPVRNLASPQASTYNCNYNYAQAMQGQSLSGCSPPRFSSHIGSFGSSQKGKGLSPLQRVFNSLNNQCMQPVENLSLPAIEEFLEDYQAAGDGFGVGVGVGVGGGGYSSTKVSDIATSSECFDLQNSIPAMLDGLAMTNSSTRFCGSVNDESTSGASQLSQESDLYQMASIATASLSQALQQERRHEKHHKQHSQQQQQSHAHPNPHGLMVPLPIASEQQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTTSNPKPSSSAFPPNSIEILKIYQIVYQACPYIKFAHFTSNQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPDGAPFLRITGVGPSIESVRETGRCLTELAHSLHIPFEFHPVGEQLEDLKPHMFNRRIGEALAVNSVNQLHRVPGNCLGNLISMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESQQRAKVEQYIFAPEIRNIVACEGAERVERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00266 669 Pfam GRAS domain family 306 668 IPR005202 -
Bva03g00266 669 PANTHER GRAS FAMILY PROTEIN RAM1 28 667 - -
Bva03g00266 669 MobiDBLite consensus disorder prediction 18 39 - -
Bva03g00266 669 MobiDBLite consensus disorder prediction 255 289 - -
Bva03g00266 669 ProSiteProfiles GRAS family profile. 297 668 IPR005202 -
Bva03g00266 669 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 667 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00266 Bva-Chr3 1612048 1614704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00266 300 669 GRAS Transcription Factor Family AT1G66350 45.745 7.69e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva03g00266 GRAS 1.4e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00266 - - jre:109001839 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00266 03 1612048 1614704 Bva03g00266 03 1612048 1614704 ECH