Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00259 ATGATCATATACATACGTATGACTCTGATATCCAGTAGGAAGGTTAGACAGAAGAGGAGATTATATCGAACATCTTGTTCGCATCTTGTGTTTTCTATGGGAAACGGTCATATGAGGATTGAAAGActccatttttcttccctAGAGATTCGTAGGAATTTGATGGGTCATTGCCCATGTTTTGGGCCGCGGAAGAAGGACAAGACAGAAAAAGTCAAGGTTGAGGAGGAGAAAGCCAATGAAACCAAGCACGAACCTCCGGAGGATGTCCCTGAGCCTCAGATATCTTCAGGAGTCGTGTCAGAACTACCTCCCACGACGGAGATCAACACTCCTAACAAGGCTTCTATATTTAACTTTCGAGAGCTTGCAACAGCGACGAAAAATTTCAGGGATGAGTGCTTTATTGGGCAAGGTGGATTTGGAGCTGTTTACAAGGGCAAGTTAGAGAGTACTGGTCAGATTGTAGCTGTTAAACAACTTGATACTGCAGGAGCCCAAGGGGAGAAAGAGTTTCTAATGGAGGTTCTCATGCTTTCTCTTCTACATCATCCCAACCTTGTCAACATGATTGGTTACTGTTCTGAAGGGGATCAACGTCTTCTTGTATATGAGTACATGCCTTTAGGGTCCTTAGAATCTCACCTCCATGATCTTCCACCAGATGCAGAACCTCTACAATGGAAAGCAAGAATGAACATAGCCTATGGAACAGCACTTGGGTTAAATTATCTGCACAATGAAGCAAATCCTCCTGTCATATACAGGGACTTAAAATCAGCTAACATATTGCTGGATGAGGGTTTTCATCCTAAACTTTCTGATTTTGGTCTTGCAAAGTTTGGTCCAACTGGAGATCAGTCACATGTCTTCTCTAGGGTCATGGGAACTCATGGTTATTGTGCCCCTGAGTATGCCAGCAGTGGAAAGTTAACAACGAAATCTGACATCTACAGTTTTGGGGTACTCTTGTTGGAGCTAGTTACTGGACGTAAAGCACTAGATGATAGCCACGGCCATGACAAATTCCTTGTTGAGTGGGCAAGTTCAGTATTCAGAGAAAGAGGGGGTTTTGCCAAATTAGCAGATCCATGGTTGCAGGGTAACTACTCAAAACATGGCTTAAGGGTAGCTGTTGAATTGGCATTCATGTGTCTTCGGGAAGATGCCAATTTCAGGCCCCCTGCAGGTGATATAGTGCTTGCTCTAGGATACTTAACATCCCGGAGTAATACTCCGAAAGAGTCCAGCATGGTGATAGACACAGAAAGTATTGCAGCAAATGAAACATCAAGAATGCTGGTTACAAGCCTGCAAAGAGAGAAAGCTGTTGCAGAGGCCAAGCAATGGGGAGAAAtatggagagaaaaaagaagacaaactGCACAAAGTAGTTCTGATGGACTaaatagata 1415 0.4226 MIIYIRMTLISSRKVRQKRRLYRTSCSHLVFSMGNGHMRIERLHFSSLEIRRNLMGHCPCFGPRKKDKTEKVKVEEEKANETKHEPPEDVPEPQISSGVVSELPPTTEINTPNKASIFNFRELATATKNFRDECFIGQGGFGAVYKGKLESTGQIVAVKQLDTAGAQGEKEFLMEVLMLSLLHHPNLVNMIGYCSEGDQRLLVYEYMPLGSLESHLHDLPPDAEPLQWKARMNIAYGTALGLNYLHNEANPPVIYRDLKSANILLDEGFHPKLSDFGLAKFGPTGDQSHVFSRVMGTHGYCAPEYASSGKLTTKSDIYSFGVLLLELVTGRKALDDSHGHDKFLVEWASSVFRERGGFAKLADPWLQGNYSKHGLRVAVELAFMCLREDANFRPPAGDIVLALGYLTSRSNTPKESSMVIDTESIAANETSRMLVTSLQREKAVAEAKQWGEIWREKRRQTAQSSSDGLNR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00259 471 Pfam Protein kinase domain 134 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00259 471 Coils Coil 65 85 - -
Bva03g00259 471 PANTHER OS07G0668900 PROTEIN 57 423 - -
Bva03g00259 471 Gene3D Phosphorylase Kinase; domain 1 100 206 - -
Bva03g00259 471 MobiDBLite consensus disorder prediction 65 110 - -
Bva03g00259 471 MobiDBLite consensus disorder prediction 65 90 - -
Bva03g00259 471 ProSiteProfiles Protein kinase domain profile. 130 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00259 471 PANTHER OS07G0668900 PROTEIN 57 423 - -
Bva03g00259 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Bva03g00259 471 Gene3D Transferase(Phosphotransferase) domain 1 207 429 - -
Bva03g00259 471 SMART serkin_6 130 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00259 471 SUPERFAMILY Protein kinase-like (PK-like) 109 403 IPR011009 -
Bva03g00259 471 CDD STKc_IRAK 136 400 - -
Bva03g00259 471 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00259 Bva-Chr3 1574678 1578525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00259 108 464 Glycoside Hydrolase AT3G07070 59.116 2.73e-145 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva03g00259 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00259 K13430 - cpap:110813038 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00259 03 1574678 1578525 Bva03g00259 03 1574678 1578525 ECH