Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00241 ATGATGATGGATCAGCGACAGCGAGAGAAGCTGCTTCAGAATACCGAGGCCTGTGCTTTGGTGGCAGGTGTTGGGGCTGAGCTTGGCCTTGTCACTGTAGAAGGGGACAACGGTATAAATCATGGGTCGGGTCGGATCCGCAACCATGACCACGACCTTGTTGCTGCTGTTACCACTTTGGGTACTGTTCATAGAAGGAAAAGGATGGCCAGGCAGAGGAGGTCCTCCACCTCCACCATGATGGTCAACCTTCTCTCCAAGCCATCACCTTCCACCTCCTCGCACGTGCCACTCCTCCCTCCGTTAAGATCTCATAAGACTTCCACTGCTACTACTACTAATACCTCCACTCTCCCACCCGCACGTGAAATTGATCATAGAAGGTTGAGATTCCTATTCCAGAAGGAGCTCAAGAACAGCGACGTAAGCTCGCTTCGAAGAATGATACTCCCAAAGAAAGCAGCAGAAGCCTTCCTTCCTGTCCTCGAGTCAAAAGAAGGAATTCTTATCAGCATGGATGATTTGGATGGACTTCATGTATGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAATAGCAGGATGTACGTGCTTGAGAATACTGGTGAATTTGTTAACACTCACGGCCTACGCCTTGGAGATTCCATCATAATTTACCGAGACGatcaaaatcataattatGTCATTCAAGCTAAGAAGGCTTCTGATGATCAAGATGATTTTATGGCGATAACCAGCGATACAATCAGTGATATATTTCTCCATGACTCCGAGCTTAACAAATCCACTGGTTGCCTTAATGTGATGTCGTATCCAACAGTGGATGATCCTGGCATGTCGTTCATCTACGAGACTACGTTTTCAAATGACTACTCTCCACTTGACTTTTTGGGAGGATCGATGACCAGCTTTTCAAGGATTGGGTCAGGGGAAACCTTTGGCTCTGTTGAGAATCTATCACTTGATGACTTCTATTA 977 0.4606 MMMDQRQREKLLQNTEACALVAGVGAELGLVTVEGDNGINHGSGRIRNHDHDLVAAVTTLGTVHRRKRMARQRRSSTSTMMVNLLSKPSPSTSSHVPLLPPLRSHKTSTATTTNTSTLPPAREIDHRRLRFLFQKELKNSDVSSLRRMILPKKAAEAFLPVLESKEGILISMDDLDGLHVWSFKYRFWPNNNSRMYVLENTGEFVNTHGLRLGDSIIIYRDDQNHNYVIQAKKASDDQDDFMAITSDTISDIFLHDSELNKSTGCLNVMSYPTVDDPGMSFIYETTFSNDYSPLDFLGGSMTSFSRIGSGETFGSVENLSLDDFY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00241 325 MobiDBLite consensus disorder prediction 84 121 - -
Bva03g00241 325 Gene3D - 129 246 IPR015300 -
Bva03g00241 325 SMART B3_2 133 235 IPR003340 GO:0003677
Bva03g00241 325 CDD B3_DNA 131 233 IPR003340 GO:0003677
Bva03g00241 325 SUPERFAMILY DNA-binding pseudobarrel domain 131 229 IPR015300 -
Bva03g00241 325 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 63 325 - -
Bva03g00241 325 MobiDBLite consensus disorder prediction 84 120 - -
Bva03g00241 325 Pfam B3 DNA binding domain 133 231 IPR003340 GO:0003677
Bva03g00241 325 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 63 325 IPR044800 GO:0003700
Bva03g00241 325 ProSiteProfiles B3 DNA-binding domain profile. 133 235 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00241 Bva-Chr3 1474551 1477115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00241 1 325 B3 DNA Binding Superfamily AT3G26790 47.753 1.98e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva03g00241 B3 2.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00241 - - gmx:100783961 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00241 03 1474551 1477115 Bva03g00241 03 1474551 1477115 ECH