Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva03g00241 | ATGATGATGGATCAGCGACAGCGAGAGAAGCTGCTTCAGAATACCGAGGCCTGTGCTTTGGTGGCAGGTGTTGGGGCTGAGCTTGGCCTTGTCACTGTAGAAGGGGACAACGGTATAAATCATGGGTCGGGTCGGATCCGCAACCATGACCACGACCTTGTTGCTGCTGTTACCACTTTGGGTACTGTTCATAGAAGGAAAAGGATGGCCAGGCAGAGGAGGTCCTCCACCTCCACCATGATGGTCAACCTTCTCTCCAAGCCATCACCTTCCACCTCCTCGCACGTGCCACTCCTCCCTCCGTTAAGATCTCATAAGACTTCCACTGCTACTACTACTAATACCTCCACTCTCCCACCCGCACGTGAAATTGATCATAGAAGGTTGAGATTCCTATTCCAGAAGGAGCTCAAGAACAGCGACGTAAGCTCGCTTCGAAGAATGATACTCCCAAAGAAAGCAGCAGAAGCCTTCCTTCCTGTCCTCGAGTCAAAAGAAGGAATTCTTATCAGCATGGATGATTTGGATGGACTTCATGTATGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAATAGCAGGATGTACGTGCTTGAGAATACTGGTGAATTTGTTAACACTCACGGCCTACGCCTTGGAGATTCCATCATAATTTACCGAGACGatcaaaatcataattatGTCATTCAAGCTAAGAAGGCTTCTGATGATCAAGATGATTTTATGGCGATAACCAGCGATACAATCAGTGATATATTTCTCCATGACTCCGAGCTTAACAAATCCACTGGTTGCCTTAATGTGATGTCGTATCCAACAGTGGATGATCCTGGCATGTCGTTCATCTACGAGACTACGTTTTCAAATGACTACTCTCCACTTGACTTTTTGGGAGGATCGATGACCAGCTTTTCAAGGATTGGGTCAGGGGAAACCTTTGGCTCTGTTGAGAATCTATCACTTGATGACTTCTATTA | 977 | 0.4606 | MMMDQRQREKLLQNTEACALVAGVGAELGLVTVEGDNGINHGSGRIRNHDHDLVAAVTTLGTVHRRKRMARQRRSSTSTMMVNLLSKPSPSTSSHVPLLPPLRSHKTSTATTTNTSTLPPAREIDHRRLRFLFQKELKNSDVSSLRRMILPKKAAEAFLPVLESKEGILISMDDLDGLHVWSFKYRFWPNNNSRMYVLENTGEFVNTHGLRLGDSIIIYRDDQNHNYVIQAKKASDDQDDFMAITSDTISDIFLHDSELNKSTGCLNVMSYPTVDDPGMSFIYETTFSNDYSPLDFLGGSMTSFSRIGSGETFGSVENLSLDDFY | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva03g00241 | 325 | MobiDBLite | consensus disorder prediction | 84 | 121 | - | - | |
Bva03g00241 | 325 | Gene3D | - | 129 | 246 | IPR015300 | - | |
Bva03g00241 | 325 | SMART | B3_2 | 133 | 235 | IPR003340 | GO:0003677 | |
Bva03g00241 | 325 | CDD | B3_DNA | 131 | 233 | IPR003340 | GO:0003677 | |
Bva03g00241 | 325 | SUPERFAMILY | DNA-binding pseudobarrel domain | 131 | 229 | IPR015300 | - | |
Bva03g00241 | 325 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 | 63 | 325 | - | - | |
Bva03g00241 | 325 | MobiDBLite | consensus disorder prediction | 84 | 120 | - | - | |
Bva03g00241 | 325 | Pfam | B3 DNA binding domain | 133 | 231 | IPR003340 | GO:0003677 | |
Bva03g00241 | 325 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 63 | 325 | IPR044800 | GO:0003700 | |
Bva03g00241 | 325 | ProSiteProfiles | B3 DNA-binding domain profile. | 133 | 235 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva03g00241 | Bva-Chr3 | 1474551 | 1477115 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva03g00241 | 1 | 325 | B3 DNA Binding Superfamily | AT3G26790 | 47.753 | 1.98e-86 | 261 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Bva03g00241 | B3 | 2.7e-16 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva03g00241 | - | - | gmx:100783961 | 436.802 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva03g00241 | 03 | 1474551 | 1477115 | Bva03g00241 | 03 | 1474551 | 1477115 | ECH |