Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00239 ATGGCTTTCTCAGATAGCTCTCGTCGTCAATCTATGATCCCTCGCTATCTCTACTCCTCATCTTCTTCCCAGAAAACCCTACCTCTGGAGAAGATGCTCAACTCTTCTAGCCCCTTCGCCTCTGTTTCCACGCAAGCTTCGAATCACGAAGCAGGATCGTCGGGGAAGAGCTTCATGATTCCTGCTCCCAGCGAGCCTGGCAAGATTGAGATGTACTCTCCGGCCTTCTATGCTGCTTGCACGGCTGGTGGAATCCTCAGCTGTGGTCTCACTCACATGGCTGTCACACCTCTTGATCTAGTCAAATGTAACATGCAGATTGATCCTGCAAAGTACAAGAGCATTTCATCTGGATTTGGAGTTTTGCTTAAGGAACAGGGATTCAGGGGTTTTTTCCGTGGCTGGGTGCCCACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGATTCTACGAGTTCTTCAAGAAGTATTATTCTGATATCGCTGGCCCCGAGTATGCTGCCAAGTACAAAACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCAGATATTGCACTTTGCCCCTTCGAGGCTGTGAAAGTTCGTGTTCAAACCCAGCCAGGTTTTGCTAGAGGTCTGGCTGATGGGCTTCCCAAATTCGTCAAGTCAGAAGGAACTTTAGGgTTATACAAGGGTATAGTTCCTCTGTGGGGACGCCAGATTCCATATACGATGATGAAGTTTGCTTCTTTCGAGACCGTCGTTGAGTTGATCTACAAGCATGCTATCCCGAAACCAAAGAATGAGTGCAGCAAAGGTCTGCAACTCGGTGTGAGTTTTGCTGGTGGCTACGTAGCCGGTGTATTGTGTGCAGTTGTTTCTCATCCTGCTGACAACCTTGTCTCCTTCCTGAACAATGCCAAAGGGGCAACAGTCGGTGATGCTGTGAAGAAGCTTGGCTTGTGGGGTCTATTCACCCGTGGTCTCCCTCTCCGTATTGTGATGATTGGAACCCTCACTGGAGCTCAATGGGGAATATACGATGCATTCAAAGTCTTTGTGGGGCTGCCAACTACTGGAGGTGTCACCCCCGCGCCTGCTCAGGCTCCTCCTACCACTGAGCTTGCAAAGGCGTA 1133 0.496 MAFSDSSRRQSMIPRYLYSSSSSQKTLPLEKMLNSSSPFASVSTQASNHEAGSSGKSFMIPAPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETVVELIYKHAIPKPKNECSKGLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPAPAQAPPTTELAKA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00239 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Bva03g00239 377 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 369 - -
Bva03g00239 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bva03g00239 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Bva03g00239 377 Gene3D Mitochondrial carrier domain 75 353 IPR023395 -
Bva03g00239 377 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Bva03g00239 377 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bva03g00239 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 369 IPR044677 GO:0005315|GO:1990547
Bva03g00239 377 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00239 Bva-Chr3 1464431 1468567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00239 6 368 Chloroplast and Mitochondria Gene Families AT5G14040 80.435 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00239 K15102 - gmx:547633 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01900 04 19370110 19374216 Bva03g00239 03 1464431 1468567 BWGD
Bva03g00239 03 1464431 1468567 Bva03g00239 03 1464431 1468567 ECH
Bva03g00239 03 1464431 1468567 Bva04g01900 04 19370110 19374216 ECH