Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00227 atgtCCATCTTGCCCTCATATACCCAAGGATCAACTTCGTCGTCTTCTCCATCTGCGGTATCTCCCAAACCTAATTCACAGCATGGAAACCTTCTCCACccatctccttctccttcatcCCTCTCCTCTCTCTCCCACCAGCTCCAGGAATTTGGATCTCTCCGGATCTCCGATTTTCAATCTTCAGTCGCTGTGCCCGACGACAATCCAGGTCCATCGACTCCTACTCCAGAAGATTCTGGTGGACCTTCCGGAAAGGTGACAGATTTTGGGTCTCCAAGTGGTATGGAAATTTTGCCTTACCAAAACTCTGGAACACATTCTAGGAGTCGCTTTAGCAGAAGGGCAGTTGGATCATCCCAGTCAAAAGCGAAGACTACAGGCTCACATGCTTCTGCAGGAAACCAACAAAATCCTGGGTCTGCCAGTTCTCACATGAGCACCCCAAGTGCTGGACGAAAATCTCAGATGGTAAATGGTAATCACTTGCTGAACTTTCATTATGATCCTATATCCCGCCCTCAGCCAAGGGGCCCTCCTCCTCccccaagaaggcagcagaaGAGAAAACCTTACAACAAAGATTTGTTTCTTCAggcaaattacaaatttattgtGCTAGATTCAGGAAATTATTCATCTGAGTTTATGGATCCAGATAAAATGTTACAGTGGGAAGATATTATATGCGTGAGGTATTCCACCCCATTTTTAGTTCAGTGTCCAATTTGTCTAGAGAATCCTCTTTGCCCGCAGATAACCTCATGTGGACATATTTTCTGTTTCCCATGTATCCTACAATACTTGTTAATGGGTGAGGAGGATCACAAAGGCGATTGCTGGAAAAGGTGTCCCTTGTGCTTTGTTATGATATCTGCAAAGGATTTATATACCATCCAGATTGAAAATGTCGAGCAGTACCTTGTAGGAGATAATATTGAATTCACACTTCTAGCTCGAAAAAAGGATTCCTTTAATCTGTcacataaaaacaaacaagagaCAGATGTCACATCTTGTGGCAGTACTGGTCTGTCTGATCCCTTTTCTAAGTTCATACTCACATCAGATGTGGATCTCTCAGTGAGGCAGGCAATATCAGATCTAGACAGTTGGCTGGCCAGAGCAGATTCAGGTCTTGTTGATGACCTGGAGAAGCTTCCGTATGTTTCTGCTGCAATGCAACAATTAGAACAGAGGAAAAAATATTGGAATGAGCACTGGGCTAGTGGCAGTGACAAATCCTCTGGGTCTACTGATTGCAGATATGATGTACCATCAGCAACTATAAATGGTACTGATGCTAATGACGAAACACATTTCAGTAGGTCAGGAACTTCCTCTGCTGATTTCCATGACCAAAGCAAGGGAAAGATATTGGATAAATCACACAGAAGTGCCTCTCCAGATCGAACTGTGGATATGGAGAAAGTTTTAGTAGACCAAGACAGTAATTTATCCTCTTCCTATGAGGAGAAAAATGACATTCAGAGGCATTCAAATGACTTTAGAGATGTGAAGGACAGTGATTCATACAATTTCTACCAGGCTGTTGATGGGCAACGTCTCATTCTTCATCCCCTAAACATGAAGTGTCTACTTAACCATTATGGGAGCTATGACATGCTTCCTCACAGAATAAGTGGAAAGATTCTGCAATTGGAGACAGTCACTCAATCAGAGGCCTTGAGGAGGCGTTACCGATTCTTAAGTCACTTTCCTTTAACAACAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGCAATTGCCTTCCGAAGCACTGGCCCCTTTCATGGATGAAATAAAGAAGCGTGCTAACCAGAGGAAACAACTTGCAAAGAAGGAACGGAAGGAAAAAATTAGGGCTGAAGCTGCCTCTTCATACTCACTTCCCATAACAACCAGTTATCGACTTACCAATCGTGATGACCCTCCCACGTTCTCCATGGATGACTTTGAAGCTTTGGGAAATTCTGCCGTGTCGGCAAGTCCTCCGGTTGTTGGGGAGAGGTTATTGTTCTCAAATGTTACGAGGCTGGGTTTTGCTGCTGGTCACGGTTCTTCATCCTTAAACACTCAAGAAGCCAGCAACCTACACAATTATGGTCGGACAACAGATTCTCCTGGCACAAGAGGCCCAAGTAATATGGAGACACCGCCATCATTTGTCAATGTTATATCTAGAGCAGAATCTCTTAAAAGCTTACATGCGCCCAAGACAAATGACTCCGGTAAGAAGGGAAAGAAGCCAAGTCGAGTTCTTCTGTCAACAGCTGGTGGTAGGCGTTATTG 2294 0.4237 MSILPSYTQGSTSSSSPSAVSPKPNSQHGNLLHPSPSPSSLSSLSHQLQEFGSLRISDFQSSVAVPDDNPGPSTPTPEDSGGPSGKVTDFGSPSGMEILPYQNSGTHSRSRFSRRAVGSSQSKAKTTGSHASAGNQQNPGSASSHMSTPSAGRKSQMVNGNHLLNFHYDPISRPQPRGPPPPPRRQQKRKPYNKDLFLQANYKFIVLDSGNYSSEFMDPDKMLQWEDIICVRYSTPFLVQCPICLENPLCPQITSCGHIFCFPCILQYLLMGEEDHKGDCWKRCPLCFVMISAKDLYTIQIENVEQYLVGDNIEFTLLARKKDSFNLSHKNKQETDVTSCGSTGLSDPFSKFILTSDVDLSVRQAISDLDSWLARADSGLVDDLEKLPYVSAAMQQLEQRKKYWNEHWASGSDKSSGSTDCRYDVPSATINGTDANDETHFSRSGTSSADFHDQSKGKILDKSHRSASPDRTVDMEKVLVDQDSNLSSSYEEKNDIQRHSNDFRDVKDSDSYNFYQAVDGQRLILHPLNMKCLLNHYGSYDMLPHRISGKILQLETVTQSEALRRRYRFLSHFPLTTTFQLCEIDLSEQLPSEALAPFMDEIKKRANQRKQLAKKERKEKIRAEAASSYSLPITTSYRLTNRDDPPTFSMDDFEALGNSAVSASPPVVGERLLFSNVTRLGFAAGHGSSSLNTQEASNLHNYGRTTDSPGTRGPSNMETPPSFVNVISRAESLKSLHAPKTNDSGKKGKKPSRVLLSTAGGRRY 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00227 764 SMART ring_2 241 287 IPR001841 -
Bva03g00227 764 MobiDBLite consensus disorder prediction 409 471 - -
Bva03g00227 764 ProSitePatterns Zinc finger RING-type signature. 256 265 IPR017907 -
Bva03g00227 764 PANTHER RING FINGER 10 FAMILY MEMBER 115 760 IPR039739 -
Bva03g00227 764 MobiDBLite consensus disorder prediction 1 69 - -
Bva03g00227 764 Coils Coil 599 623 - -
Bva03g00227 764 ProSiteProfiles Zinc finger RING-type profile. 241 287 IPR001841 -
Bva03g00227 764 CDD RING-HC_RNF10 241 288 - -
Bva03g00227 764 SUPERFAMILY RING/U-box 240 294 - -
Bva03g00227 764 MobiDBLite consensus disorder prediction 686 764 - -
Bva03g00227 764 Pfam Zinc finger, C3HC4 type (RING finger) 241 287 IPR018957 GO:0046872
Bva03g00227 764 MobiDBLite consensus disorder prediction 454 471 - -
Bva03g00227 764 MobiDBLite consensus disorder prediction 1 192 - -
Bva03g00227 764 MobiDBLite consensus disorder prediction 97 162 - -
Bva03g00227 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 338 IPR013083 -
Bva03g00227 764 MobiDBLite consensus disorder prediction 686 739 - -
Bva03g00227 764 MobiDBLite consensus disorder prediction 409 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00227 116 694 C3H Transcription Factor Family AT3G26730 56.879 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00227 - - adu:107494651 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00227 03 1391945 1397978 Bva03g00227 03 1391945 1397978 ECH