Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00223 ATGAGTTCAAGCGATTGCAAGACTAAGAAATGTCCCAAGATTGTTTTGAAGTACAGAAGAAAAGGAGCAAAGATGGAACAAGAAAAACCAAAGGAGTCCGAGGAGCCGTCAATGCAGAGAAGAACTAGTGCTCGAATCCAAGCCAAGCAAAAAGTAGATAAGGAGCTTCTGGTGCGTCGTAGGGTAGAGCTGCTAGATGAGCAAGATGACGGTGGAATTGAAAAGAAGAGTCGCTCCAAAAGAAGTCGTAGCATCGAAAATGTGGTTAAGGTAGAAGCGGTTGAGGAAGGAAAGGGAGGCAACACGGTACCCAAGTCGAAGTCGGATGAGTTGACCAAGCTTGAGGGCAATGCAACAGTTAAGGGTTCGGTAGAAGAAAAAGTCGATTCAGAGAGTGGGGCAGCGAATTTGGTTGAGAAAAGTGACACTCTTAAGGTGAAAGAGACACTGAGGTTGTTTAACAAGCACTATCTTCATTTCGTTCAGGAGGAGGAGAAGAGGTGTAGGAAAGTGGAAGCAGATCGGAAAGCCTCTAAAAAAGGTTCAAAATCTAAGAAAAAGGCAACTCATGAAGATACAAAGAACACTGCTAAGCGACCTGATTTAAAGGCTGTATCCAAGATGATGGAAAATAATGAGATACTGTGCCCTGAGAAAAGAATTGGCAACATTCCAGGTATTAAGGTTGGACATCAGTTTTATTCACGTGCTGAAATGGTTGCTGTTGGTTTTCATAGCCACTGGTTGAATGGCATTGACTATATGGGCCAATCCTACTGCAAAGGGGAGCAGAGTCACTATACGTTCCCCCTTGCTGTGGCCATTGTTTTGTCGGGCATGTATGAGGATGATCTTGATAATGCCGAGGATGTAGTGTATACCGGTCAAGGTGGTCATAATTTGAATGGTGATAAGCGTCAAATTCGAGATCAGGTGTTGGAGCGAGGTAATTTGGCACTCAAGAACTGTGTCGAGCAATGTGTACCTGTTAGAGTGGTTCGCGGTCATGAATGTAGAAACAGTTACTGTGGTAAAGTTTACACATATGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGAAAAGGGAATTTCTGGATTTACAGTCTATAAGTTTCGCCTTAGGAGGCTTGAAGGACAGCCAACATTAACTACTAATCAGgtttattttaataatggaCGTGTACCTCAGTCTGTTGCAGAGATACGAGGGTTGGTATGCGAGGATATCACCGAAGGTCAAGAGGATTTGCCAATTCCTGCAACTAATTTGGTTGATAACCCCCCTGTTGCACCCACAGGTTTTACCTATCGCAAGTCAATTCAGATTTCAAAAAATGTGAAGCTTCCCATGGAAGCTACTGGATGCAAATGCAAAGGCATTTGTGTAGATCCTCGGTCCTGCGCGTGTGTTATGCGTAATGGCTCTGATTTTCCCTATGTATCTCGTGACGGTGGCAGGCTAATTGAAGCTAAAGATgttgtatttgaatgtggTCCCAACTGTGGCTGTGGTCCTGGTTGTGCCAACCGAACATCTCAGAGAGGGCTGCGATATCGACTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTTATACCTTCTGGAGCTCCCGTTTGTGAGTACACAGGAATACTCATGAGGACGGATGATCTGGACAGACTGGAGTACGTAAACGAGAACAACTATATTTTTGAGATAGATTGCTTGCAGACAATGAAGGGCCTCGGTGGAAGAGAGAGGCGTTCACGAGATGCATCACTTCCAGCTATCAATCTGTCGGTCAAATCTGATGATCAAAATTCTGAAAGCGTGCCAGAGTTTTGCATTGATGCAGATTCTACCGGAAATATTGCTAGATTTATAAACCACAGCTGTGAACCCAATCTCTTTGTTCAATGTGTTTTAAGCTCACACCTCGACCTTAAACTCGCTAGGGTGGTGCTGTTTGCTGCAGATAACATACCACCACTGCAGGAACTCACATATGACTACGGCTATGCCTTGGATAGTGTCTATGGTCCCGATGGGAAGGTAAAGCAAATGCCATGCTTTTGTGGAGCAGCTGGTTGCAGGAAGCGGTTATTCTA 2108 0.4379 MSSSDCKTKKCPKIVLKYRRKGAKMEQEKPKESEEPSMQRRTSARIQAKQKVDKELLVRRRVELLDEQDDGGIEKKSRSKRSRSIENVVKVEAVEEGKGGNTVPKSKSDELTKLEGNATVKGSVEEKVDSESGAANLVEKSDTLKVKETLRLFNKHYLHFVQEEEKRCRKVEADRKASKKGSKSKKKATHEDTKNTAKRPDLKAVSKMMENNEILCPEKRIGNIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQSYCKGEQSHYTFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLNGDKRQIRDQVLERGNLALKNCVEQCVPVRVVRGHECRNSYCGKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQPTLTTNQVYFNNGRVPQSVAEIRGLVCEDITEGQEDLPIPATNLVDNPPVAPTGFTYRKSIQISKNVKLPMEATGCKCKGICVDPRSCACVMRNGSDFPYVSRDGGRLIEAKDVVFECGPNCGCGPGCANRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILMRTDDLDRLEYVNENNYIFEIDCLQTMKGLGGRERRSRDASLPAINLSVKSDDQNSESVPEFCIDADSTGNIARFINHSCEPNLFVQCVLSSHLDLKLARVVLFAADNIPPLQELTYDYGYALDSVYGPDGKVKQMPCFCGAAGCRKRLF 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00223 702 SUPERFAMILY PUA domain-like 204 395 IPR015947 -
Bva03g00223 702 MobiDBLite consensus disorder prediction 17 49 - -
Bva03g00223 702 MobiDBLite consensus disorder prediction 169 201 - -
Bva03g00223 702 SMART G9a_1 217 380 IPR003105 -
Bva03g00223 702 SMART preset_2 407 503 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva03g00223 702 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 54 702 IPR025794 GO:0016571
Bva03g00223 702 ProSiteProfiles YDG domain profile. 222 376 IPR003105 -
Bva03g00223 702 Gene3D SET domain 400 702 IPR046341 -
Bva03g00223 702 Gene3D - 204 393 IPR036987 -
Bva03g00223 702 Pfam SET domain 530 672 IPR001214 GO:0005515
Bva03g00223 702 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 38 701 - -
Bva03g00223 702 SUPERFAMILY SET domain 404 679 IPR046341 -
Bva03g00223 702 MobiDBLite consensus disorder prediction 19 39 - -
Bva03g00223 702 ProSiteProfiles Post-SET domain profile. 686 702 IPR003616 -
Bva03g00223 702 ProSiteProfiles Pre-SET domain profile. 454 516 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva03g00223 702 SMART PostSET_3 686 702 IPR003616 -
Bva03g00223 702 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 38 701 - -
Bva03g00223 702 ProSiteProfiles SET domain profile. 519 672 IPR001214 GO:0005515
Bva03g00223 702 SMART set_7 519 678 IPR001214 GO:0005515
Bva03g00223 702 Pfam SAD/SRA domain 221 380 IPR003105 -
Bva03g00223 702 MobiDBLite consensus disorder prediction 96 116 - -
Bva03g00223 702 Pfam Pre-SET motif 410 511 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00223 Bva-Chr3 1356179 1365240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00223 208 702 EF-hand Containing Proteins AT5G13960 67.807 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva03g00223 SAD_SRA 9e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00223 K11420 - jre:109001855 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00223 03 1356179 1365240 Bva03g00223 03 1356179 1365240 ECH