LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g00222	ATGGAGACTAGCGCGATACAAGAGGGAGAAATTGAGAAGGTTGAATTTGAGTCTTCGGAGATTGAGTACGTGAGTTATGGCGGCGAATATCATCTACCCCTTATCATGAACCTTGTAGACCAAGAGCTAAGCGAGCCTTACTCTATCTTCACGTACCGTTACTTCGTCTATCTCTGGCCTCAGCTTTCTTTCCTGGCATTTCACAAAGGTAAATGCCTGGGTACGGTGGTCTGTAAGATGGGTGAGCATCGCAATACCTTCAGAGGTTACATTGCCATGCTGGTTGTGATCAAGCCCTATAGAGGAAAAGGcattgCTACAGAACTTGTCACTAGATCTATCAAAGTGATGATGGAATCAGGTTGTGAAGAGGTTACGCTGGAAGCGGAAGTGACAAATAAAGGAGCACTGGCACTATATGGGCGCCTTGGCTTTATCAGGGCTAAGCGGCTTTTCCATTACTACTTGAATGGAGTTGATGCTTTCCGTCTAAAACTCCTATTTCCCCGCCTTGACTTGCACCCGTCTCTGCCTATGATGGCAGAAAGAGAAGACAGCCATCACCATGAGCCTAAAGACAATGGACCAACTCAAGAATG	599	0.4591	METSAIQEGEIEKVEFESSEIEYVSYGGEYHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCLGTVVCKMGEHRNTFRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRLDLHPSLPMMAEREDSHHHEPKDNGPTQE	199

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g00222	199	PANTHER	N-ALPHA-ACETYLTRANSFERASE 30	7	168	IPR044542	GO:0004596\|GO:0017196
	Bva03g00222	199	Pfam	Acetyltransferase (GNAT) family	56	145	IPR000182	GO:0016407
	Bva03g00222	199	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	19	169	IPR000182	GO:0016407
	Bva03g00222	199	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	31	168	IPR016181	-
	Bva03g00222	199	CDD	NAT_SF	63	128	-	-
	Bva03g00222	199	Gene3D	-	29	197	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g00222	Bva-Chr3	1352347	1354965	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Bva03g00222		Acetyltransf_1	6.4e-16	CL0257

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g00222	K00670		-	gmx:100806790	343.969

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva03g00222	03	1352347	1354965	Bva03g00222	03	1352347	1354965	ECH