Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00216 ATGACTCCTTTTCCGTGGCCGCTTGTTTTGCCcttgctttttttcttccctgaAGCTCTGACTAGTTCGATTCCAAGCGATGCATTACCGCTTCTCAGCTTCAAGGACTCTGTCTCTTCCGACCCTTCTAACCTGCTTTCTGGTTGGACCAACCAATCTTCTAGCAATCACTGCCGGTGGTACGGTGTCACCTGCGACAACCGCATCTCCGGCGAAGGCAGAGTCATTGCCTTGAACTTAACCGGTCTTGTTGGCGGTAAACTAACACCTTCAATTGGAGACATATCTGAGCTTCGGGTTTTGTCCATTCCCCACAATTTGTTCTCCGCTGAGATCCCAGTGAGCATAGGGAAGCTTCGGCTTTTGCAGGTTCTTGAGCTTCAAGGAAACAACTTCTCCGGGAGCATCCCCAACCAGATAAGctatcttcaatttcttcgCCTTCTTAATCTTTCTAATAATGCTCTTACTGGTCCATTACCCAGTAAATTGATTGGCTCCGGAAGTATAAGATTCCTTGATTTGTCGAATAATCAGCTTTCAGGTTCAATTCTAGTGAATTCTTCGAGTGGGTGTGATTCCTTGAACCATTTGAAAGTTTCCCACAATTTTCTCTCCGGTGAAATCCCACCGGAAATCGGGAAATGTTGGAACTTGAGAACTCTTTTACTCAATGGGAATTCCTTAGAAGGTCGAATTCCTCCCGAGATTGGGAATATCTTGGAGCTTAGAGTTCTAGATGTTTCTAAGAATAGCCTCACCGAAAGCATCCCAAAAGAGCTAGCTAATTGCCGAAAATTGTCTATACTTGTGTTGACTGATTTATTCGAAGATAACTCTCCTTCTGATGTAAGTTTGGTGGATAGCTTTCGAGGAGAATTCAATGCCTTTGTGGGAAATATTCCTCCTCAGGTGCTTTTGCTTTCAAGTTTGCAGATTTTGTGGGCACCAAGAGCCAATCTCGGTGGAAGATTGCCCAGTGGCTGGACAGACACATGCTCGCTGAGAGTACTCAACTTGGCACAGAACTACTTTACTGGGGTGATACCAGAAAGTTTGGGGTTGTGTCGAAATCTAACTTACTTGGACTTGAGTTCCAATAATTTAGTGGCGTATCTCTCTTCCAGGGAGCTTCGGGTTCCATGTATGATGTACTTCAATGTCAGCCGGAATAATATATCTGGGACCCTCCTAGAACTTGGTAAAAAAAGCTGTGTTATGAGCCGCATCCCTGCTGCAGAAGACCTTAAGTTACTAGGAATAGAAGATTTTAGCGATGCATACTTTAGAATTCCTGTTTGGGAACATAAGATAAATGCTCTGGTTAGGCCAGGTTTAGAAGAGACTATTGTCATTAAGCATGATTTTAGTTGGAATAACTTCATGGGATCTTTACCCTCATTCTCTCTTGGAGATAATCATTTTGCTACTAAGAGTAAGGTCTCCTATCAGCTGTTACTAAATAATAACAAGTTCAATGGAACTCTACCATCTGGGCTAGTTTTGAACTGTAATGATCTCACGATGTTGTCAGTTAACTTGAGTGCGAACCAATTATCTGGTGGGAATTCGCAAAAATTGCTTCTGGACTGTCTGAAATTGACAGAGTTTGAGGCTGCGTGCAACCAGATTGGTGGGTCAATTGGACCTGGCATAGGTGACTGGATGATGCTTCAACGTCTTGATTTGAGTGGGAACAAATTATCTGGATCGCTGCCTGTTCAGTTGGGAAACCTTATAAACATGAAATGGATGCTTCTAGGAGGTAACAATCTAACAGGGGAAATCCCTTCTCTACTTGGTCAGTTGACTTCCCTAACTGTTCTGAATCTATCCCATAATGCTCTAATGGGAACCATTCCCACAAATTTGACAAATGCCATAAATCTTGAAATTCTGTTGCTAGATCACAACAAACTTTCTGGTGAAATACCTTCCTCTTTGTCTACTCTTTCTGCTCTAACAAAACTGGATGtttctttcaacaaattttctgGTCATATACCCCATCTTCAACACCCAAGCGATTGTGATTCCTATCGAGGGAATGAACTCCTGCATTCTTGCCCTGATCCATACTCAGACTCACCTGCTTATCTTCCTGTCCCTCTTGAAGTACAAAATAGgcatagagaaagaaaattgaagacatTGATAATTGCTGTGGTGACTTCTGCTTCTGTATCGCTCTGCATACTTCTGGGAATAGTATTGGTGATCACAATGGGAAGGAGCAAGTTTAGTCGGCTTGGCAGTATTAGAAGGAGACAAGTAGTGACATTTCAAGATGTTCCAATTGAATTGAGTTATGACAATGTGGCCATAGCTACTGGCAACTTCAGCATCAGGAATCTAATTGGCACAGGTGGGTTTGGATCAACTTACAAGGCAGAATTGTGCCCAGGTTTTCTTGTTGCCATAAAGAGGTTGTCCATAGGTAGGTTTCAAGGCATTCAACAGTTTGAAACAGAAATAAGGACATTAGGGAGTATTCGACACAAGAACCTTGTAACTCTTATTGGTTATTATGTGGGAAAGTATGAAATGTTCTTGATTTACAACTACCTTTCTGGTGGGAACCTTGAAGCTTTCATACACGACAGGTTAGGAGAAAAAATGCAGTGGCCAATTATACTCAAGATAGCAATAGACATAGCAGAGGCTCTTGCTTACCTTCATTACACTTGTGTTCCTCGCATAGTTCACCGGGATATCAAGCCAAGTAATATCTTATTGGATGAGGACTTAAATGCCTACCTTTCAGATTTTGGCTTGGCAAGACTTCTAGAGGTATCTGAGACCCATGCCACCACTGATGTGGCCGGCACATTTGGCTATGTTGCACCTGAATATGCCACCACTTGTAGGGTTTCTAATAAGGCAGATGTTTACAGCTTTGGTGTTGTGTTGTTGGAATTAATGTCAGGAAGAAAGTCACTGGATCCTTCATTTTCTGAATATGGGAATGGATTCAATATTGTACCATGGGCAAAGTTGCTGATGGCGGAAGGTCGTTCTTCTGGGCTATTCTCTCCTGCTCTGTGGGAAGCAGGGCCCAGGGGGAAGTTGTTGGGGCTTCTAAGGCTTGCGTTAACCTGCACAGCAGAAACTCTTTCTATTCGGCCATCAATGAAGCAGGTTCTTGAGAAATTGAAGCAATTGAAAAGTTG 3170 0.4183 MTPFPWPLVLPLLFFFPEALTSSIPSDALPLLSFKDSVSSDPSNLLSGWTNQSSSNHCRWYGVTCDNRISGEGRVIALNLTGLVGGKLTPSIGDISELRVLSIPHNLFSAEIPVSIGKLRLLQVLELQGNNFSGSIPNQISYLQFLRLLNLSNNALTGPLPSKLIGSGSIRFLDLSNNQLSGSILVNSSSGCDSLNHLKVSHNFLSGEIPPEIGKCWNLRTLLLNGNSLEGRIPPEIGNILELRVLDVSKNSLTESIPKELANCRKLSILVLTDLFEDNSPSDVSLVDSFRGEFNAFVGNIPPQVLLLSSLQILWAPRANLGGRLPSGWTDTCSLRVLNLAQNYFTGVIPESLGLCRNLTYLDLSSNNLVAYLSSRELRVPCMMYFNVSRNNISGTLLELGKKSCVMSRIPAAEDLKLLGIEDFSDAYFRIPVWEHKINALVRPGLEETIVIKHDFSWNNFMGSLPSFSLGDNHFATKSKVSYQLLLNNNKFNGTLPSGLVLNCNDLTMLSVNLSANQLSGGNSQKLLLDCLKLTEFEAACNQIGGSIGPGIGDWMMLQRLDLSGNKLSGSLPVQLGNLINMKWMLLGGNNLTGEIPSLLGQLTSLTVLNLSHNALMGTIPTNLTNAINLEILLLDHNKLSGEIPSSLSTLSALTKLDVSFNKFSGHIPHLQHPSDCDSYRGNELLHSCPDPYSDSPAYLPVPLEVQNRHRERKLKTLIIAVVTSASVSLCILLGIVLVITMGRSKFSRLGSIRRRQVVTFQDVPIELSYDNVAIATGNFSIRNLIGTGGFGSTYKAELCPGFLVAIKRLSIGRFQGIQQFETEIRTLGSIRHKNLVTLIGYYVGKYEMFLIYNYLSGGNLEAFIHDRLGEKMQWPIILKIAIDIAEALAYLHYTCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSNKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMAEGRSSGLFSPALWEAGPRGKLLGLLRLALTCTAETLSIRPSMKQVLEKLKQLKS 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00216 1056 SUPERFAMILY Protein kinase-like (PK-like) 758 1051 IPR011009 -
Bva03g00216 1056 PRINTS Leucine-rich repeat signature 603 616 - -
Bva03g00216 1056 PRINTS Leucine-rich repeat signature 170 183 - -
Bva03g00216 1056 SUPERFAMILY L domain-like 90 675 - -
Bva03g00216 1056 ProSiteProfiles Protein kinase domain profile. 780 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00216 1056 Gene3D Phosphorylase Kinase; domain 1 741 855 - -
Bva03g00216 1056 Gene3D Transferase(Phosphotransferase) domain 1 856 1055 - -
Bva03g00216 1056 SUPERFAMILY L domain-like 484 573 - -
Bva03g00216 1056 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Bva03g00216 1056 ProSitePatterns Protein kinases ATP-binding region signature. 786 808 IPR017441 GO:0005524
Bva03g00216 1056 SMART serkin_6 780 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00216 1056 Pfam Protein kinase domain 782 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00216 1056 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 1055 - -
Bva03g00216 1056 CDD STKc_IRAK 786 1054 - -
Bva03g00216 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 900 912 IPR008271 GO:0004672|GO:0006468
Bva03g00216 1056 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 6 1055 - -
Bva03g00216 1056 Gene3D Ribonuclease Inhibitor 438 692 IPR032675 -
Bva03g00216 1056 Gene3D Ribonuclease Inhibitor 25 187 IPR032675 -
Bva03g00216 1056 Gene3D Ribonuclease Inhibitor 286 410 IPR032675 -
Bva03g00216 1056 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00216 Bva-Chr3 1316654 1320876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00216 26 1055 Receptor kinase-like Gene Family AT3G02130 43.393 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Bva03g00216 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00216 - - gmx:100795047 1484.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00216 03 1316654 1320876 Bva03g00216 03 1316654 1320876 ECH