Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00214 ATGTCAAGGACTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTCATAGTATTTTTATGGTTCTGCTTGTCTCACCAGAGGAGTGTTTCAAGGACTTCGGAGACAGGCTCCTCTGATCCTTCCCAAGCAGGAAGACAAGGTATTGAGTTAACATTACGAGATACAAGGCGTTTTGAGATTGGAGAACTATCTCTAGCCACAAAAAATTTCAGTGACAAAAATTTGATTGGAGAAGGGAAATTTGGCGAGGTTTACAAGGGTTTACTTCATGATGGAATGCTTGTAGCCATCAAAAAGCGACGTGGAATCCCGAGTCAGGAATTTATTGATGAGGTACGCTACCTCTCATCTATTAATCACCGGAACCTTGTAACTCTATTGGGCTACTGCCAGGACAGCAATTTTCAGTTTCTTATATACGAATATGTACCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCCAGTCAACAATCGCGTGAGAAGCTAGAATTCAAGCATAGACTCTCAATAGCTCTAGGTGCAGCTAAAGGCTTGGCCCATCTTCACTCTTTGAGCCCCCGTTTGGtgcataaaaatttcaaaacagcCAACGTTCTTGTGGATGAAAACTTCATTGCTAAGGTTGCAGATGCAGGACTTCGCAATTTCCTGGGAAGAATCGATATTGCAGGCCCATCTTCTCAAGTGATAGCAGATGAGATATTCCTTGCTCCTGAAGTGAAAGAATTTATTCGATTTTCTGAAAAGAGCGATGTGTACAGTTTTGGGGTATTTCTGCTGGAGCTGTTAAGTGGAAAGGAAGCAAAAGAACCACGTTCTTCTGACTCTAATCAAAATCTGGTTGAATGGGTGCAAATTGATCGAGATCATCACAATATTTCTAGCATCATTGATCAGATACTGGGGAGTAGTTTCACAGCCGAAGGCATGGAAGAATTCATTCTGCTGATAATTAGATGTATAGATTTTTCAAGTGAGAGGCGACCTTCCATGAGCTATGTAGTAATGGAACTCGATCGAATATACgagaaagaaatgaacttGACAACTATGATGGGTGAAGGAACCCCGACCGTGACCCTTGGAAGTCAGTTGTTCAAAGCAACAAGGTG 1136 0.4164 MSRTLAAILGGAAGAVALVGIVIVFLWFCLSHQRSVSRTSETGSSDPSQGRQGIELTLRDTRRFEIGELSLATKNFSDKNLIGEGKFGEVYKGLLHDGMLVAIKKRRGIPSQEFIDEVRYLSSINHRNLVTLLGYCQDSNFQFLIYEYVPNGSVSSHLYGASQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRIDIAGPSSQVIADEIFLAPEVKEFIRFSEKSDVYSFGVFLLELLSGKEAKEPRSSDSNQNLVEWVQIDRDHHNISSIIDQILGSSFTAEGMEEFILLIIRCIDFSSERRPSMSYVVMELDRIYEKEMNLTTMMGEGTPTVTLGSQLFKATR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00214 377 Gene3D Phosphorylase Kinase; domain 1 37 148 - -
Bva03g00214 377 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 377 - -
Bva03g00214 377 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Bva03g00214 377 Gene3D Transferase(Phosphotransferase) domain 1 149 363 - -
Bva03g00214 377 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 377 - -
Bva03g00214 377 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Bva03g00214 377 Pfam Protein tyrosine and serine/threonine kinase 80 345 IPR001245 GO:0004672|GO:0006468
Bva03g00214 377 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00214 Bva-Chr3 1305511 1309875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00214 5 371 Receptor kinase-like Gene Family AT3G46290 36.364 1.82e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Bva03g00214 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00214 - - gmx:100820178 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00214 03 1305511 1309875 Bva03g00214 03 1305511 1309875 ECH