Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00191 ATGGCTGATGGTCAAGAATCAGACAAGAACATTGAGATatggaagatcaagaaattgaTCAAAGGATTGGAATCTGCAAGAGGTAATGGTACCAGTATGATTTCTCTTATAATGCCTCCACGTGATCAAATATCCCGGGTCACCAAGATGTTGGGAGATGAATTTGGAACTGCGTCAAACATCAAAAGCAGGGTGAACCGACAGTCAGTGTTGGGAGCCATTACTTCTGCTCAACAGAGGTTGAAGCTATATAATAAGGTCCCTCCAAATGGTCTGGTTCTTTATACTGGAACCATTGTAACCGAAGATGGCAAGGAAAAGAAGGTGACAATTGATTTTGAACCTTTCAAGCCTATTAATGCATCACTCTACCTCTGTGATAACAAGTTTCATACAGAAGCATTAAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTTATTGTTATGGATGGAAATGGCACCCTTTTTGGGACGTTAAGTGGAAATACACGTGAGGTGCTTCATAAATTCAGTGTTGATCTTCCAAAGAAACATGGTAGAGGAGGGCAGTCAGCTCTGCGTTTTGCCCGGCTCCGCATGGAAAAACGGCACAACTATGTTAGAAAGACTGCAGAACTTGCTACACAGTTTTTCATCAATCCTGCTACCAGTCAGCCTAATGTTTCTGGACTCATACTTGCTGGTTCAGCTGACTTCAAGACTGAGCTGAGCCAGTCAGATATGTTTGATCCTCGATTACAGGCAAAAATATTGAATGTGGTTGATGTTTCTTATGGTGGAGAAAATGGTTTTAATCAAGCTATTGAGTTATCTGCAGAGATTTG 827 0.4002 MADGQESDKNIEIWKIKKLIKGLESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00191 275 Pfam eRF1 domain 2 144 273 IPR005141 -
Bva03g00191 275 Pfam eRF1 domain 1 18 138 IPR005140 -
Bva03g00191 275 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 275 - -
Bva03g00191 275 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 275 IPR004403 GO:0003747|GO:0006415
Bva03g00191 275 Gene3D eRF1 domain 2 136 275 IPR042226 -
Bva03g00191 275 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Bva03g00191 275 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 12 274 IPR004403 GO:0003747|GO:0006415
Bva03g00191 275 Gene3D eRF1 domain 1 2 135 IPR024049 -
Bva03g00191 275 SMART eRF1_1_2 4 140 IPR005140 -
Bva03g00191 275 SUPERFAMILY Translational machinery components 142 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00191 Bva-Chr3 1190389 1193066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00191 1 275 Eukaryotic Initiation Factors Gene Family AT5G47880 94.545 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00191 K03265 - pop:7466289 536.569