Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00188 ATGGGTACCCTTAACAGAGAAGTTCCCTGTAATCTGCCTGGAGACCTAGAAGTGACCATCCAAGAATCCTCAATGGTATTTCCATCCAAACAAACTGAGAGGAAAATCATGTTCTTGTCAAACATTGACAAAGTTCTTAATTTTGATGTGCAAAGGCTTAATTTCTTTGCATCCCACCAAGATTTCCCTCCCCATATTGTGGTTGACAAGTTGAAGAACGCCCTAGCTGATGCTTTGGTGCATTATGACTTCCTCGCCGGAAGATTAAAGGTGAACTCCCAAACGGGTCGGTTGGAGGTGGACTGCAATTCAGCCGGAGCAGGGTTTGTGGTGGCCTCTAGTAGCTATAAATTGGACCAAATAGGAGACTTGGTTGATCCTAATCCAGCTTTTGCGCAATTAGTTCATAAGAATAAGGATTTCCTTGAACCAGGTGATCGCCCACTATGCGTTGTCCAGTTAACATCCTTCAAGTGCGGTGGCTTTGCAATCGGCTTTTCAACGAGCCACACCGCATTTGATGGCTCAAGCTTCAAAACCTTCTTGGAGAACCTGGCTGCATTAGCTGCTGGAAAGCCCTTGGTTGTGACACCTTGCCATGACAGGCAGCTCCTGGTGGCGCGTTCCCCGCCACATGTCAGCTTCGCCCACCACGAGTTGCTGCAGCTGGATAACCTGCGCCCAAGGTTTGACTCCGGCGTCATTGGAGCTTCTTCCGAGCAACTTGACTTCAAGATTTTCCAATTAACCTCCGACGACCTCAAAGCCCTTAAAGAGAGGGCGAAATCAGCCGAAGGCCACCACTCCACGGCCTGCATAACCGGCTTTAACGTCGTCACCGCCCACGTATGGCGGTGCAAGGCGTTGTCAGGACAAGATGATGATCCCAATAAATCATCAACTATACTATATGCTGTGGACATACGGTCTCGGTTAAATCCTCCGCTGGAAAAATCATATGTAGGGAACGCAGTGTTAACAGCACATGCGACGGCGAATTGTAAGGAGCTGGAAGAAGGTCCATTGTCGAAGTTGGTGGAAATAGTGAGTGAAGGTGCTAAGAGAATAACAGATGAGTATGCACGGTCGGCTATAGACTGGGGAGAGTTATATAATGGGTTTCCAAATGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGCAGACGTGGAGTACCCATGGGGGAAGCCAAGGTACAGTTGCCCAGTGGTTCATCACAGGAAAGATATCatacttttctttcccccaTTAAATGAGAGCGAAGGTGGCGTGAATGTGTTGGTGGCTCTCCCTCCTAGGGAAATGGCTAAGTTCCAAAGCCTATTCCACAAGttctttttactttg 1352 0.4734 MGTLNREVPCNLPGDLEVTIQESSMVFPSKQTERKIMFLSNIDKVLNFDVQRLNFFASHQDFPPHIVVDKLKNALADALVHYDFLAGRLKVNSQTGRLEVDCNSAGAGFVVASSSYKLDQIGDLVDPNPAFAQLVHKNKDFLEPGDRPLCVVQLTSFKCGGFAIGFSTSHTAFDGSSFKTFLENLAALAAGKPLVVTPCHDRQLLVARSPPHVSFAHHELLQLDNLRPRFDSGVIGASSEQLDFKIFQLTSDDLKALKERAKSAEGHHSTACITGFNVVTAHVWRCKALSGQDDDPNKSSTILYAVDIRSRLNPPLEKSYVGNAVLTAHATANCKELEEGPLSKLVEIVSEGAKRITDEYARSAIDWGELYNGFPNGEVLVSSWWRLGFADVEYPWGKPRYSCPVVHHRKDIILFFPPLNESEGGVNVLVALPPREMAKFQSLFHKFFLL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00188 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 14 448 - -
Bva03g00188 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 448 - -
Bva03g00188 450 Gene3D - 235 447 IPR023213 -
Bva03g00188 450 Gene3D - 14 221 IPR023213 -
Bva03g00188 450 Pfam Transferase family 17 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00188 Bva-Chr3 1164941 1167083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00188 16 449 Monolignol Biosynthesis Gene Families AT5G48930 31.486 4.11e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00188 K13065 K15400 gmx:100305576 625.55