Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00187 ATGGGTACCCTTTGCAAAGAAGCTCCCTTTAATCTGCCTGAAGACCTAGACGTGAGCATCCAAGAATCCTCCATGGTATTTCCATCCAAACAAACTGAGAGGAAAACCATGTTCTTATCAAACATAGACCAAGTTCTCAATTTTGATGTGGAAACGCTTCATTTCTTTGCTTCCCACAAAGATTTCCCTCCCCATATTGTTGCTGACAAGTTGAAGAACGCCCTAGCTGATGCTTTGGTGCATTATGACTTCCTCGCAGGAAGATTGAAGGTGAACTCCGAAACTGGTCGGCTAGAGGTAGATTGCAATGCTGCCGGAGCAGGGTTTGTGGTGGCCTCTAGTAACTGCAATTTGGAAGAAATAGGAGACTTGGTTTATCCTAATCCAGCTTTTGCACAGTTGGTTCATAAGAATAAGGATTTCCTTAAACCAGGTGATCACCCACTATGCGTTTTCCAGTTAACATCCTTCAAGTGTGGTGGCTTTGCAATCGGCTTGTCAACAAGCCACACCACATTTGACGGCTTTAGCGTCAAAACCTTCTTGGAGAACCTGGCTGCATTAGCTGCTGAAAAGCCCTTGGTTATGACACCTTGCCATGACAGACAACTTCTGGCCGCACGGTCCCCACCACGTGTCAGCTTTGCCCACCATGAATTGCTGCAGCTGGATAAACTTCCTCCGGAGTTTGACTCCGGCGTCTTTCAAGCCTCTTCCGAGAAGCTTGACTTCAAGATTTTCCAATTAACCTCCGAAGACCTCAAAGCCCTCAAGGAGAAGGCAAAACCCACCCAAGGCCACCACTCCGGCGCTCGCATAACCGGCTTTAACGTCATCACCGCCCACGTATGGCGGTGCAAGGCGTTGTCAGGACAAGATGATGATCCCGATAGATCATCAACTATGCTATATGCTGTGGACATACGGTCTCGGTTGAACCCTCCGCTGCCGAAATCATATGCCGGCAACGCAGTGTTGACAGCATACGCGACGGCCAAGTGTAAGGAGCTGGAAGAAGGTCCGTTGTCCAAGTTGGTGGAAATGGTGACGGAAGGTGCAATGAGAATGACAGATGAGTATGCAAGGTCAGCTGTAGACTGGGGAGAGTTATATAATGGGTTTCCAAATGGGGAGGTGTTGGTGTCTTCATGGTGGAGATTAGGGTTTGCAGACGTGGAGTACCCATGGGGAAAGCCAAGGTACAGTTGCCCAGTGGTGTATCACAGGAAAGATATCATACTTTTGTTTCCTCCATTAAATGATAGTGAAGGTGGCGGGGATGGTGTCAATGTGTTGGTGGCTCTCCCTCCTAAGGAAATGGTCAAGTTCCAAAGCCTCTTCTACAGGTTCTTCCATGAAGGTTG 1364 0.4824 MGTLCKEAPFNLPEDLDVSIQESSMVFPSKQTERKTMFLSNIDQVLNFDVETLHFFASHKDFPPHIVADKLKNALADALVHYDFLAGRLKVNSETGRLEVDCNAAGAGFVVASSNCNLEEIGDLVYPNPAFAQLVHKNKDFLKPGDHPLCVFQLTSFKCGGFAIGLSTSHTTFDGFSVKTFLENLAALAAEKPLVMTPCHDRQLLAARSPPRVSFAHHELLQLDKLPPEFDSGVFQASSEKLDFKIFQLTSEDLKALKEKAKPTQGHHSGARITGFNVITAHVWRCKALSGQDDDPDRSSTMLYAVDIRSRLNPPLPKSYAGNAVLTAYATAKCKELEEGPLSKLVEMVTEGAMRMTDEYARSAVDWGELYNGFPNGEVLVSSWWRLGFADVEYPWGKPRYSCPVVYHRKDIILLFPPLNDSEGGGDGVNVLVALPPKEMVKFQSLFYRFFHEG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00187 454 Pfam Transferase family 17 448 - -
Bva03g00187 454 Gene3D - 13 221 IPR023213 -
Bva03g00187 454 Gene3D - 232 450 IPR023213 -
Bva03g00187 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 450 - -
Bva03g00187 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 14 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00187 Bva-Chr3 1157698 1161040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00187 16 448 Monolignol Biosynthesis Gene Families AT5G48930 30.735 3.42e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00187 K13065 K15400 gmx:100305576 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01944 04 19631820 19632922 Bva03g00187 03 1157698 1161040 BWGD