Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00181 ATGGCTACTGCGATAAAGGCCGCGATTGGGGACGCAGTGTTGACTTTTATGTGGGTATTCTGTGCTTCCACGCTGGGATTAGCCACAAGCACAATTACAGCACAACTTGGGCTTCAACGCATAACCTATAATGGCTTTCCTTACCCTTCTGTTTTCGTCACCACCGTCCTCGTCTTTATTCTCGTCTTCGTCTTCACCATTATCGGCAATGCCTTGGGTGGTGCCAGCTTCAACCCCACCGGTGTCGCTACCTTTTATGCAGCTGGTGTCGGCTCAGACACCCTTATCTCCATGGCTCTCCGTTTTCCCGCTCAGGCCCTTGGTGCTGCCGGTGGTGCTCTGGCAATTATGGAAGTGATGCCGACCAAATACAAGCACATGATAGGCGGCCCTTCTTTGAAAGTTGACTTGCATACTGGAGCTATTGCTGAGGGCGTACTGACATTCTTGATTAGCTTTATTGTCCTTTTAATCGTACTCAGGGGTCCTCGTAGTGATTTTTTGAAGACTTGGTTACTTGCGGTGGCAACCGTGGCATTGGTCATGTCTGGTTCTGCTTACACTGGGCCGTCCATGAATCCTGCCAACGCCTTTGGTTGGGCATACTTGAACAACTGGCACAACACGTGGGACCAATTCTATGTTTATTGGATTTGCCCCTTCATTGGAGCAATATCGGCTGCTTGGCTGTTCCGTATTGTGTTCCCTCCACCGAAGCCAAAACAGAAGAAAGCCTA 737 0.498 MATAIKAAIGDAVLTFMWVFCASTLGLATSTITAQLGLQRITYNGFPYPSVFVTTVLVFILVFVFTIIGNALGGASFNPTGVATFYAAGVGSDTLISMALRFPAQALGAAGGALAIMEVMPTKYKHMIGGPSLKVDLHTGAIAEGVLTFLISFIVLLIVLRGPRSDFLKTWLLAVATVALVMSGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFIGAISAAWLFRIVFPPPKPKQKKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00181 245 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PANTHER AQUAPORIN SIP1-1 3 245 IPR044222 GO:0015250
Bva03g00181 245 SUPERFAMILY Aquaporin-like 4 240 IPR023271 -
Bva03g00181 245 Gene3D Glycerol uptake facilitator protein. 1 244 IPR023271 -
Bva03g00181 245 PANTHER AQUAPORIN SIP1-1 3 245 - -
Bva03g00181 245 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00181 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00181 Bva-Chr3 1130221 1132882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00181 3 245 Major Intrinsic Protein MIP AT5G18290 54.656 1.82e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00181 K09875 - gmx:100792787 397.127