Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00179 ATGGGAACCCCACAATCAAATTTGCCACCAGGCTTTAGGTTTCACCCCACCGATGAAGAACTCATTCTCCACTACCTTAGAAAGAAGGTAGCTTCTGTGCCCTTGCCGGTTTCCATCATTGCAGAGGTTGATATCTACAAGTGTGATCCATGGGATTTACCAGCAAAGGCAGCGTTTGGGGAGAAAGAATGGTACTTTTTCAGTCCTAGAGACCGCAAGTACCCAAATGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCAACTGACAACAACAAACCCATTAAGCTCAAGGACTCCTCTATGAGGTTGGATGACTGGGTTCTGTGCCGGATATACAAGAAGTCTAAATATGCTTTGCCTGCAACAACAGAGCCAACAGTGGTCGGTGTTGATGAGCATGATCAAGCAGAAGAATATCTATTCAAAGATACCATTTTGCCTCCAAGCTCAAAGCCAGCCCCTGCACCTCACAACGCGCTGATCTCTCAGAaatctttgtctttttccAACTTGTTAGATGCCATGGACTACTCCATGTTGAGCAGCTTCTTATCAGATCAGAACCATCCCGGCAACCCAACCAGGTGTGGATCTACTGCACCAATAGACTCTCTGAATCTAGACCAATCTGTAGCTTCTCCTAATCAGAATagcaacagcaacagcaaTAGCTATTTGTTTCAATTGAACAACCCTTCTTCAGCAGGGCCCACCATGGAAAATTGCAGGCCCAAACGCGAGCTTCTAGACATAGATGAGGATCTGATACCATCATCAAAGAAATACCTGAGTTCTTGCAATTTCGCCAACAGTGCCAATACCCAATACGAGAACCCGCAATGGAACCTGCTCCTCAAGCCGTCATTGCTGAATCAGCAGTTACTGTTGGGTCCTCATCTTCTATTTCAAGGATA 926 0.4482 MGTPQSNLPPGFRFHPTDEELILHYLRKKVASVPLPVSIIAEVDIYKCDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATDNNKPIKLKDSSMRLDDWVLCRIYKKSKYALPATTEPTVVGVDEHDQAEEYLFKDTILPPSSKPAPAPHNALISQKSLSFSNLLDAMDYSMLSSFLSDQNHPGNPTRCGSTAPIDSLNLDQSVASPNQNSNSNSNSYLFQLNNPSSAGPTMENCRPKRELLDIDEDLIPSSKKYLSSCNFANSANTQYENPQWNLLLKPSLLNQQLLLGPHLLFQG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00179 308 PANTHER BNAC05G47490D PROTEIN 98 255 - -
Bva03g00179 308 PANTHER BNAC05G47490D PROTEIN 6 98 - -
Bva03g00179 308 PANTHER NAC TRANSCRIPTION FACTOR 56 6 98 - -
Bva03g00179 308 ProSiteProfiles NAC domain profile. 8 151 IPR003441 GO:0003677|GO:0006355
Bva03g00179 308 Pfam No apical meristem (NAM) protein 9 101 IPR003441 GO:0003677|GO:0006355
Bva03g00179 308 SUPERFAMILY NAC domain 4 118 IPR036093 GO:0003677|GO:0006355
Bva03g00179 308 PANTHER NAC TRANSCRIPTION FACTOR 56 98 255 - -
Bva03g00179 308 Gene3D NAC domain 17 106 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00179 Bva-Chr3 1114575 1116332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00179 4 308 NAC Transcription Factor Family AT3G04070 43.017 4.12e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g00179 NAM 8.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00179 - - gmx:100301906 374.785