Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00174 ATGAGAGAAAGGGGAGTGGAGTGTGGTTTTGATGCtttcaagaaaatagaaatgaaaaagCCATTTGGATCAAGAAAAGTTGCACTCATCAGGAAAGAAAGCATGTACTATCATCAGCAACAAGAAGCAAGGAACATTCACTCTCTGAGGATGACGAAGCCTAACCCTGCTGAGAGACATGTGCTCCTGCATGGTGGGAATGGTGCTGGAAACTCAGGACTTGTCCTTTCAACTGATGCTAAGCctagactgaaatggacgccAGATCTCCATGAGCGGTTTGTAGAAGCAGTAAATCAACTAGGAGGAGCAGAGAAGGCTACACCTAAGTCAGTATTGAAACTCATGGGGATTCCTGGGCTTACACTATACCACTTAAAGAGTCACCTACAGAAGTACAGACTCAGTAAAAATCTGCATGGACAGGTCAATAGTTTCACCAATAAAAACAGCAGAACGTCTGAAGACAGTTGGATgtatatgaataatttaagCATTGGTCTCCAGCAAAACAAAAACCCAGAAATAAATGAGGCACTAACGATGCAAATTGAAGTGCAGAGAAAGCTACATGAGCAGCTTGAGGTACAGAGACACTTGCAGATGCGCATAGAGGCTCAAGGGAAATACCTTCAGGCAGTGCTGGAAAAGGCACAGGAGACACTAGGAAGACCAAATTTAGGTACAATAGGACTTGAAGCTGCCAAAGTTCAACTCTCTGAACTGGCATCCAAAGTATCCACTCAAAGCCTGGATTCTACATTTTCGGAGCTAAGAAAATTACATGCATTCTGGCCTCAGCAAAGAGACCAAGGGCTTAAATCAGAGGCCACCGCCACTGAGTTTTCAATGGACGATGGTTCTCCATTCTTAATTTCTGAAGAGGGAATTAAAGAGCCTCTTTTGCAAAAGTCTCATCTCTCGTTGTGTAATGACCTCAAGGAGGATATGGTGTTTCTTTCCTCATTAAATGATggtgcagaaaaagaaaaaatttctccaGGAAGAATCTCAAGCCACATATCCATGGAAATTGGAAGACGACCTGTTTCGAAAGAAGAtctaaaggaagaaaataggCAAGTGCCAGTTAAACAGAACTATGAAAAAAGTTATCAAGATCATAGACTGCCTTGCCTGAAAGCAAAACTGGATTTAAATGCCCACGATGCTAACGATGCTTCTTCTCACACCAAACACTTCGACTTGAATGGTTTCAGCTGGAACTG 1229 0.3954 MRERGVECGFDAFKKIEMKKPFGSRKVALIRKESMYYHQQQEARNIHSLRMTKPNPAERHVLLHGGNGAGNSGLVLSTDAKPRLKWTPDLHERFVEAVNQLGGAEKATPKSVLKLMGIPGLTLYHLKSHLQKYRLSKNLHGQVNSFTNKNSRTSEDSWMYMNNLSIGLQQNKNPEINEALTMQIEVQRKLHEQLEVQRHLQMRIEAQGKYLQAVLEKAQETLGRPNLGTIGLEAAKVQLSELASKVSTQSLDSTFSELRKLHAFWPQQRDQGLKSEATATEFSMDDGSPFLISEEGIKEPLLQKSHLSLCNDLKEDMVFLSSLNDGAEKEKISPGRISSHISMEIGRRPVSKEDLKEENRQVPVKQNYEKSYQDHRLPCLKAKLDLNAHDANDASSHTKHFDLNGFSWN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00174 409 Pfam Myb-like DNA-binding domain 83 134 IPR001005 -
Bva03g00174 409 Pfam MYB-CC type transfactor, LHEQLE motif 175 221 IPR025756 -
Bva03g00174 409 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 38 409 - -
Bva03g00174 409 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 38 409 IPR044848 GO:0003700
Bva03g00174 409 SUPERFAMILY Homeodomain-like 80 136 IPR009057 -
Bva03g00174 409 Coils Coil 177 197 - -
Bva03g00174 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 138 IPR017930 -
Bva03g00174 409 Gene3D - 80 138 - -
Bva03g00174 409 Coils Coil 310 330 - -
Bva03g00174 409 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 81 136 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00174 Bva-Chr3 1087943 1090507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00174 113 409 G2-like Transcription Factor Family AT3G04030 45.536 1.26e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva03g00174 Myb_DNA-binding 6.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00174 - - gmx:100786282 438.728