Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00164 ATGCCAGAGTTGAGGAGTGGAGCCAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGCCCCACTACCTATTGATCAAGAAGAGAATTGGACACAGCCTGCTCAAAACAGAACCAGGAGAAGAGTTGGAAACGGAAGAGGCAGAGGTGGTAATGCCACAGCTTTAGCCAAAGGGCCTTCGTCAGCCATACCCACAAGGCGGCGAACTCCAGCCAGTAGAGGTCGGGGACTCAGGTTGACTAATCTTGATCCTGAACCTGTTGCGTTAGGGGCACCAGAACCCCTTGATAATCGTGTAGAGGTAATGGTCAATAATAACATTGTGATGGAGGGTGGAAATGCAGACAAGGTGGTGGGagctgaagaagaagcaaCCACAACTCCTGTTCCTGAGAAGGTACAAGTTGGAAGTTCTCCTGTATAtaagatagaaagaaaattaggtaAGGGAGGATTTGGCCAAGTGTATGTTGGGAGAAGGGTAAGTGGTGGCTCTGATCGGAACGGTGCTGATGCAATTGAGGTTGCACTGAAGTTCGAGCACAGAAATAGTAAAGGCTGCAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAATACACTAAATGGTTGTTATGGCATTCCCTGTGTTCATTACAAGGGCCGCCAAGGAGATTTCTACATTCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGTCAATTGATGTCGCCAAGTATGGTTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTCAGAAGCTCCACTCGAAAGGGTTTGTGCATGGAGATGTAAAACCGgaaaattttttacttggCCAACCTGGAACAGCTGATGAGAAGAAGCTGTATCTGGTTGATCTTGGTCTGGCATCTAGATGGAAGGACACGTCATCTGGTCAACATGTTGAATATGATCAGAGACCTGACATATTCAGGGGGACGATAAGGTATGCAAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGTAGAGATGATCTTGAATCACTGGCATACACTTtaatatttctcataaaaGGGAGGCTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGTCCACTTCTCCAGAGTTGATGTGTTGCTTATGTCCTGCCCCATTTAGGCACTTCCTTGAAGCTGTTAGTAATATGAGATTCGATGAAGAGCCAAATTATCTCAGgctgatttcattttttgaaagttTAATCGAACCATGTACACCTTTAAGACCAATCAGAATTGACGGAGCTTTGAAgGTTGGACAAAAGCGGGAAAGACCACTTGTAAATTTGGAAGATGAGCAACCAAAGAAGAAAGTGCGATTAGGGACTCCTGCTACCCAATGGATATCAGTATATAATGCACATCGTCCCATGAAGCAGAGATATCACTATAATGTGCCAGAAACAAGGCTCCAACAGCATATAGACAAGGGTAATGAGGATGGGTTGTACATCAGATGCGTAGCCTCTGCAGCAAATCTGTGGGCCATTATCATGGATACGGGAACAGGTTTTTCTTCCCAGGTTTATGAATTGTCAGCTGTCGTCCTTCATAAGGATTGGATCACAGAACAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGCTAATGGGAGTTCCTTAGTTGTCATGTCCAAAGGAAGTCCTTACACACAGCAGTCTTACAAAGTGAGTGAATCGTTTCCTTTCAAGTGGATAAACAAGAAGTGGAAAGAAGGTTTCCATGTTACCTCCATGACTACTGCTGGCAATCGCTGGGGTGTCGTTATGTCCCGGAACGCTGGGTTTTCTGATCAGGTTGTGGAGCTTGACTTTTTATATCCAAGTGAAGGAATCCATCGCCGGTGGGAGAGTGGTTACCGGATAACATCTATGGCTGCTACTCCTGATCAGGCTGCCTTCATTCTGAGTTTACCAAAACGCAAGTTGCTTGATGCTAGTCAAGAGACCCTGCGTACCACTGCCTTCCCTAGCACCCATGTAAAGGAAAaatggtccaagaatctttACATTGCTTCCATATGTTATGGACGGACTGTGTGCTA 2105 0.4347 MPELRSGARRSKRLGDLQPAPLPIDQEENWTQPAQNRTRRRVGNGRGRGGNATALAKGPSSAIPTRRRTPASRGRGLRLTNLDPEPVALGAPEPLDNRVEVMVNNNIVMEGGNADKVVGAEEEATTTPVPEKVQVGSSPVYKIERKLGKGGFGQVYVGRRVSGGSDRNGADAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPCVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQLMSPSMVACIAVEAISILQKLHSKGFVHGDVKPENFLLGQPGTADEKKLYLVDLGLASRWKDTSSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCLCPAPFRHFLEAVSNMRFDEEPNYLRLISFFESLIEPCTPLRPIRIDGALKVGQKRERPLVNLEDEQPKKKVRLGTPATQWISVYNAHRPMKQRYHYNVPETRLQQHIDKGNEDGLYIRCVASAANLWAIIMDTGTGFSSQVYELSAVVLHKDWITEQWEKNYYISSIAGAANGSSLVVMSKGSPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWESGYRITSMAATPDQAAFILSLPKRKLLDASQETLRTTAFPSTHVKEKWSKNLYIASICYGRTVC 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00164 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bva03g00164 701 SMART serkin_6 141 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00164 701 Pfam Protein kinase domain 141 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00164 701 PANTHER BNAA05G37270D PROTEIN 98 674 - -
Bva03g00164 701 PANTHER CASEIN KINASE-RELATED 98 674 - -
Bva03g00164 701 CDD STKc_CK1 141 415 - -
Bva03g00164 701 ProSitePatterns Protein kinases ATP-binding region signature. 147 178 IPR017441 GO:0005524
Bva03g00164 701 MobiDBLite consensus disorder prediction 1 91 - -
Bva03g00164 701 ProSiteProfiles Protein kinase domain profile. 141 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00164 701 SUPERFAMILY Protein kinase-like (PK-like) 141 429 IPR011009 -
Bva03g00164 701 Gene3D Transferase(Phosphotransferase) domain 1 110 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00164 Bva-Chr3 1031831 1038164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00164 141 373 AGC Kinase Gene Family AT3G08730 22.979 1.46e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva03g00164 Pkinase 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00164 - - gmx:100801967 1236.48