Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00150 ATGGAAATTCATTTCCAGCAACCAAGGCAATATCAAAAAGCAAGCATTCCAATCAGCAAAGGAGGCAAattcaaaggaagaaatagaaACAGCAACACTAACAAGTTTGTTGGGGTGAGACAAAGACCTTCAGGAAGATGGGTAGCTGAGATCAAAGACACAACTCAGAAGATCAGAATGTGGCTTGGCACATTTGAGACTGCAGAGGAAGCAGCCAGAGCTTATGATGAAGCTGCATGCCTTCTTCGTGGCTCCAATACTCGCACCAACTTCATTACACATGTGTCTATGGATTCTCCTCTTGCTTCCCGGATTCGAAATCTGCTCAAAAACAGGAAGGGAACCAAACAAGAGCAGGAGGTGGAAGCTTCTGCTCCTACAGTCAGCAACACTAGCAGTACCAGCACTAGTTCAAGTTCTAGTTCCAGCAATAATGAGAACAGTGAAAACTCTTCTTCTGGTGAGACAATTCAAGAAACACACATGTTTGAGGATGCATATAGACCAGATTTAAGCAATTGCAAGGAGGAATTTCAATCAGGGTCCATATCCAATCTTTCATGTGGTTTTGGAACTATGTTTGATAGTTTTCCTTTCGTGGATGTGCCAAAGACTGATGGCCTGCCTGATACAGCTGACATGGAGCTTTCAGAATTTGAAAGAATGAAAGTTGAAAGACAAATATCAGCTTCACTCTATGCAATTAATGGATTGCAAGAGTATATGGAAACAGTTCGGGATTCTAATGAAGCTTTCTGTGATCTTCCACCCTTATGCTCATTGTTCTGTTA 791 0.4109 MEIHFQQPRQYQKASIPISKGGKFKGRNRNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSMDSPLASRIRNLLKNRKGTKQEQEVEASAPTVSNTSSTSTSSSSSSSNNENSENSSSGETIQETHMFEDAYRPDLSNCKEEFQSGSISNLSCGFGTMFDSFPFVDVPKTDGLPDTADMELSEFERMKVERQISASLYAINGLQEYMETVRDSNEAFCDLPPLCSLFC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00150 263 MobiDBLite consensus disorder prediction 112 156 - -
Bva03g00150 263 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 15 250 - -
Bva03g00150 263 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Bva03g00150 263 MobiDBLite consensus disorder prediction 120 156 - -
Bva03g00150 263 MobiDBLite consensus disorder prediction 1 33 - -
Bva03g00150 263 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 15 250 - -
Bva03g00150 263 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Bva03g00150 263 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00150 Bva-Chr3 973904 974695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00150 32 263 AP2-EREBP Transcription Factor Family AT5G19790 44.856 4.16e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g00150 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00150 K09286 - gmx:100796898 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01975 04 19786257 19788266 Bva03g00150 03 973904 974695 BWGD