Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00148 ATGAGGattccatcatcatcatcatcatcaacgaGCAAGGCAACACCATGTTGTAGCAAGGTTGGGATAAAGAGAGGGCCATGGACGCCGGAGGAGGATGAGATTTTGGCCAATTTCGTCCAAAAGGAAGGAGAAGGACGGTGGCGTACGCTGCCGAAACGGGCTGGGCTACAGCGTTGCGGGAAGAGCTGCCGCCTGCGGTGGATGAATTATCTTCGCCCCTCTGTCAAGAGAGGGCATATTGGTCCCGATGAGGAAGATCTCATCCTTCGCCTCCACCGTTTACTCGGCAACAGATGGTCGTTGATAGCTGGAAGAATACCGGGAAGGACAGATAACGAGATAAAGAACTATTGGAATACCCATCTCAGCAAGAAGCTGATAAGCCAAGGCATAGACCCAAGGACCCACAAGCCGTTAATCAATAACGATAGCATTCCCAATCTCCAGAGAAGGGAAAATTctgaaccaaataaaaaatcaaatattcctCATCCAATCTCTCAAGCAAGCAACTACCAAACAGATGCTGCTATTCATCAAGGCAGTACTGGGTATCAGAATATAACAGAAGGGAATCACAACAGTACTGGTAATGACGACGTAGTTGTGATGGGGATGGGGCGAGTTGAAGTAAAGCATGACATTAATGGCGGCCAGGAAGATACTTTCTCTTCGTTTCTGGATTCTTTGATTAATGATAGCGGAGTCGACAATCAGCAGCTGCAGGATAACGTCTTTGCTTTCACTTCTCCTGCGCAATCCTTCAACCCTGTCTTTTGGGAAAGTGAACTAGATCAGATGTCCAATGGATACTTTAGGGGATG 827 0.4486 MRIPSSSSSSTSKATPCCSKVGIKRGPWTPEEDEILANFVQKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIGPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLINNDSIPNLQRRENSEPNKKSNIPHPISQASNYQTDAAIHQGSTGYQNITEGNHNSTGNDDVVVMGMGRVEVKHDINGGQEDTFSSFLDSLINDSGVDNQQLQDNVFAFTSPAQSFNPVFWESELDQMSNGYFRG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00148 275 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 9 247 - -
Bva03g00148 275 Gene3D - 25 77 - -
Bva03g00148 275 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Bva03g00148 275 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 247 - -
Bva03g00148 275 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Bva03g00148 275 CDD SANT 83 123 IPR001005 -
Bva03g00148 275 CDD SANT 27 72 IPR001005 -
Bva03g00148 275 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Bva03g00148 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Bva03g00148 275 SMART sant 24 74 IPR001005 -
Bva03g00148 275 SMART sant 77 125 IPR001005 -
Bva03g00148 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Bva03g00148 275 Gene3D - 82 163 - -
Bva03g00148 275 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Bva03g00148 275 Pfam Myb-like DNA-binding domain 82 123 IPR001005 -
Bva03g00148 275 MobiDBLite consensus disorder prediction 131 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00148 Bva-Chr3 961505 962652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00148 11 236 MYB Transcription Factor Family AT3G13540 59.389 2.99e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g00148 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00148 K09422 - qsu:112003883 310.071