Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva03g00146 | ATGAACGATCTTCTATCGGGATCGTTTGAGATCCCACGGAGTCAAAGTAATGGAGTCAGAGATATTGAGTTAGGAGCATATGGAATGAATTCAGGAGAATTGGGCTTggataatttcttcaaaaagGTTCAAGAACTTGATAGACAATATGCAGCACTGGATAAACTTCTGAAGAATCTCCTGGATGCATACGAGGAGTCCAAAGCTGTTACAACGGCTGCCGCCATAAAGGCTATTAAGCAAAGAATGGAGAAAGATGTtgatgaaattaagaaaattgccCGTCatttaaagacaaaaattgaagaacttGACAAAGAGAATCTGACAAATAGGCAGGAGCCTGGGTGTGGAAAAGGATCTGGCATTGACCGGTCAAGAACAGCAACAACCATcgccttaaaaaagaaactgaagGACAAAATGGCTGAATTTCAGTCCCTGCGGGAAACCATCCAACAAGAATATCGTGAAGTTGTTGAGAGACGTGTGTTTACAGTGACCGGCACAAGAGCTGATGAGGagACTATTGACAGACTAATTGAAACTGGAGATAGCGAACAAATCTTCCAGAAGGCAATTCAGGAACAAGGACGAGGCCAGATAATGGACACTCTGGCAGAAATCCAAGAGCGGCACACTGCAGTCAGAGAAGTAGAGAAGAAGCTTCTTGATTTACAAGAGATATTTCTGGACCTGGCGGTGTTAGTAGATGCACAAGGGGACATGCTTGACAATATCGAATCACAGGTCTCAAGTGCAGTAGATCACGTGCAGCAAGGTAATAACGCCCTCATTAAGGCAAAGAAGCTACAGAAGAATTCAAGAAAATGGATGTGCATTGCAATTATCATACTTCTCATTGTTGTTATAATCACCGTTGTTGGTGTCATCAAACCATGGGGTAACAAAAATGGTGCCTA | 923 | 0.3944 | MNDLLSGSFEIPRSQSNGVRDIELGAYGMNSGELGLDNFFKKVQELDRQYAALDKLLKNLLDAYEESKAVTTAAAIKAIKQRMEKDVDEIKKIARHLKTKIEELDKENLTNRQEPGCGKGSGIDRSRTATTIALKKKLKDKMAEFQSLRETIQQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHTAVREVEKKLLDLQEIFLDLAVLVDAQGDMLDNIESQVSSAVDHVQQGNNALIKAKKLQKNSRKWMCIAIIILLIVVIITVVGVIKPWGNKNGA | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva03g00146 | 307 | Coils | Coil | 80 | 107 | - | - | |
Bva03g00146 | 307 | Coils | Coil | 135 | 158 | - | - | |
Bva03g00146 | 307 | Pfam | SNARE domain | 242 | 294 | IPR000727 | - | |
Bva03g00146 | 307 | Gene3D | - | 196 | 299 | - | - | |
Bva03g00146 | 307 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 206 | 268 | IPR000727 | - | |
Bva03g00146 | 307 | CDD | SynN | 36 | 193 | IPR006011 | GO:0016020 | |
Bva03g00146 | 307 | Coils | Coil | 43 | 63 | - | - | |
Bva03g00146 | 307 | SMART | SynN_4 | 31 | 157 | IPR006011 | GO:0016020 | |
Bva03g00146 | 307 | SUPERFAMILY | t-snare proteins | 35 | 261 | IPR010989 | GO:0016020|GO:0016192 | |
Bva03g00146 | 307 | Pfam | Syntaxin | 38 | 241 | IPR006011 | GO:0016020 | |
Bva03g00146 | 307 | PANTHER | SYNTAXIN | 3 | 297 | IPR045242 | - | |
Bva03g00146 | 307 | SMART | tSNARE_6 | 201 | 268 | IPR000727 | - | |
Bva03g00146 | 307 | CDD | SNARE_syntaxin1-like | 205 | 267 | - | - | |
Bva03g00146 | 307 | Gene3D | - | 33 | 160 | - | - | |
Bva03g00146 | 307 | PANTHER | - | 3 | 297 | - | - | |
Bva03g00146 | 307 | ProSitePatterns | Syntaxin / epimorphin family signature. | 212 | 251 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva03g00146 | Bva-Chr3 | 950202 | 956113 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva03g00146 | 1 | 307 | SNARE and Associated Proteins | AT3G03800 | 73.616 | 9.80e-158 | 441 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva03g00146 | K08486 | - | gmx:100306329 | 453.366 |