Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00143 ATGACGACAGTAACATGTTGTCACACCATAGTTCCGTCGGAGGATACTCCGAATGTCCGTTGGAGGTTGTCTGAGATTGACCAAATGCAACCATTGAAGCACACTCTCTCCGTCTACGTTTACAAACCAAACCCAGACATCGCCACAACCACGCCGCCAATCCAGGCCATGATCGATTCCCTCTCCAAAATACTAGTCTACTATTACCCACTCGCCGGCAGATTGCACTGGGCACAATCCACTCACGATCGTCTCGAACTTCACTGTAACGCCATGGGTGTCAAGCTCTTCGAAGCCGAATCCCAAGCCAAACTAGCAGACTACGCCGACTTTGAAACCGACGCCGTTAGAGATCTCGTTCCCAAGTTTGACTACGAAAACTCACCCATAGAGGAGTGGCCTCTCTTACTGGTCCAACTCACTAGATTGAGCTGCGGTGGCTTCTGCGTTGGCGTAGCCAGTTCTCACGTCGCACTCGATGGTTGGGCCGCGATTCAGTTCGTGAAACTCTGGGGCAAGATGGCTCGCGGTCAATCCTTAGACCCACAAGAAATCCCATTTCACGATCGGATATTTCTCAAACCAAGCGAGCCACGTGTCCCACCACGCTACGATCACAGCGAATACAAGAAACCACCGCCGGTTCTCGGCTGCGTTGACTCGAAAGAAGAGCAAAAGAAGGAGACGAGAGTGGCCATGTTGAAGCTCACAAGCGACCAAGTTCTGAAACTGAAGAACAAAGCCAACGAAGGCTTGCAAACTGCAAGTGCTCGACCGTACAGTAGATACGAAGCCATTGCTGCACATGTATGGAGGTGTGCATGCAGGGCTCGTCAGGGTAACGAAGCCCATCAACCAACGGTGGTTCGTATGATGAGCGATATACGTAACCGATGGAAGCCACCCATTCCTTTAAATTATTCCGGGAATACAGTTTTGTTAACTTTGACGCCAGTTTCTACATACGAAGAAATCATGGGTAACCCATTGAGCTATGGTGCTCAGAAGATAAGGGATGGAGTTCAAACGTTGACTAACGACTACTGTAGGTCGTCGTTGGACTTTGTGGCGAGTCAGGAGAAAGTGGACTGGCTTAGGATTGGAAGTGTGGGGTCTAATTTTTATGGTAACCCTAATATGAGCATCGTTAGTTGGATCAACCTGCCCGTCTACGACACTGATTTTGGGTGGGGGAAGCCTCTGCGTATGGTTCCGGTGATGCGAGATGGAGATGGAAAATCGTTTATCATGCCAACTCCAGATGGTGATGGCTCTCTTATCTTAGCTTTGCGTCTTCAAACGCTACATATGGAAGCTTTCAAGAAGTTCTTCTACCAAGATATCTA 1346 0.4911 MTTVTCCHTIVPSEDTPNVRWRLSEIDQMQPLKHTLSVYVYKPNPDIATTTPPIQAMIDSLSKILVYYYPLAGRLHWAQSTHDRLELHCNAMGVKLFEAESQAKLADYADFETDAVRDLVPKFDYENSPIEEWPLLLVQLTRLSCGGFCVGVASSHVALDGWAAIQFVKLWGKMARGQSLDPQEIPFHDRIFLKPSEPRVPPRYDHSEYKKPPPVLGCVDSKEEQKKETRVAMLKLTSDQVLKLKNKANEGLQTASARPYSRYEAIAAHVWRCACRARQGNEAHQPTVVRMMSDIRNRWKPPIPLNYSGNTVLLTLTPVSTYEEIMGNPLSYGAQKIRDGVQTLTNDYCRSSLDFVASQEKVDWLRIGSVGSNFYGNPNMSIVSWINLPVYDTDFGWGKPLRMVPVMRDGDGKSFIMPTPDGDGSLILALRLQTLHMEAFKKFFYQDI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00143 448 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 448 - -
Bva03g00143 448 Pfam Transferase family 3 445 - -
Bva03g00143 448 Gene3D - 2 211 IPR023213 -
Bva03g00143 448 Gene3D - 214 446 IPR023213 -
Bva03g00143 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00143 Bva-Chr3 940713 942295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00143 10 446 Monolignol Biosynthesis Gene Families AT5G48930 37.443 5.46e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00143 K13065 - jre:108988418 452.981