Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00140 ATGGTTGCGGTCCAAGTCCAGATCCAGTCTTCACGCAGAGTCATCCCTTCTCAGCCAACACCAAATGGAAACTTTCTCATGTCCTACTGTGAACAAATCAAGGTCTCAACTCATGGATCACAGCTTTACTTTTACAAACCCTGCAGCACTAGTCATGATGCATCAAACTTGTATGTGGAGACTCTGAGAACATCTCTAAGCCAAGCATTGGTTCACTACTATCCCTTCGCCGGCCGGTTGTCTTGGATTAACGGTGCTCGCATGGAACTACACTGCAACGCCATGGGAGTACCACTCTTGGAAGCTAGTTGTGACGCAAGCTTGGCTGATTTGGGTGATTTTGCGGAGCCTAATCAAATCCAGCAACAGTTTGTGCCCATGTTTGATTATAGTTGTCCCATTGAGCAGATGCCTCTAATGATGGCACAACTTACGAGATTCCAGTGTGGTGGTCTTGTTCTGGGATTGGCCTTCTGTCGTGCACTGGTTGATGGAGCAGCTGTGGCGAATTTCATTAAATCGTGGCAAAGTTGGCCAGGGGAGAGTCTTTA 551 0.4755 MVAVQVQIQSSRRVIPSQPTPNGNFLMSYCEQIKVSTHGSQLYFYKPCSTSHDASNLYVETLRTSLSQALVHYYPFAGRLSWINGARMELHCNAMGVPLLEASCDASLADLGDFAEPNQIQQQFVPMFDYSCPIEQMPLMMAQLTRFQCGGLVLGLAFCRALVDGAAVANFIKSWQSWPGESL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00140 183 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 9 177 - -
Bva03g00140 183 Pfam Transferase family 5 176 - -
Bva03g00140 183 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 177 - -
Bva03g00140 183 Gene3D - 1 178 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00140 Bva-Chr3 932037 933577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00140 4 177 Monolignol Biosynthesis Gene Families AT5G48930 34.286 2.34e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00140 K13065 - zju:107429144 180.644