Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00139 ATGCCCTTGCGTTTTCATCATTCTGAGTTTGACCCACCACCCCTTTGGCTGGGAACCAAGGCAAAGGCAGCATCACAAGGAGAAGACAAGGCTAGTGATACCCTTTTGAGACTCACCAAAGCCCAAGTGGAGAAGCTAAAGAAGAAAGTTCGTAACTTTGACGACAAAAAACTAGATCCGCCCTATACTAGTTTTGAGGTTATAACAGGACATCTGTGGAAGTGCGTCTGCAAGGCACGGCACGGCACAGTGGCAATGGAGAGCAACCAACAAGGTTGTCCACGTTGGTTAACTGTCGAAACCGTTTGGAGCCACCCCTTCCTGAAACCTTTGAGTTTCGCCGTTAAGAATGTAAGACAAGCAGTTGAGAGGATGTCCGATGACTATGTCAGATCAGCTCTTGCTTATATAGCACAACAGAAGGACATGAATTCTCTAAGGTACCCTTCTCATTCCTCTGTAGTAGGCACTGGAGGACCATTTAGGGGAAACCCAAATATGTACATTGTCAGCTGGAAGAATTTTGCATTATATGACGCAGACTTTGGGTGGGGAAAACCAGTTCATATTGGTCCAGGGCCTATAAATACTGATGGCAAGGCTTTCATTATGGATAATGGCAATGGCGATGGATTTAATGTAGCTATTTGCTTGCAAGCATCACAGCTAAATGCTTTGAACAAGTTGTTCTATGAGGATATAGAGGAGAAGTTACTTCATTCTTCCAAATTGTG 734 0.4441 MPLRFHHSEFDPPPLWLGTKAKAASQGEDKASDTLLRLTKAQVEKLKKKVRNFDDKKLDPPYTSFEVITGHLWKCVCKARHGTVAMESNQQGCPRWLTVETVWSHPFLKPLSFAVKNVRQAVERMSDDYVRSALAYIAQQKDMNSLRYPSHSSVVGTGGPFRGNPNMYIVSWKNFALYDADFGWGKPVHIGPGPINTDGKAFIMDNGNGDGFNVAICLQASQLNALNKLFYEDIEEKLLHSSKL 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00139 244 Gene3D - 94 233 IPR023213 -
Bva03g00139 244 Pfam Transferase family 36 81 - -
Bva03g00139 244 Pfam Transferase family 109 231 - -
Bva03g00139 244 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 31 236 - -
Bva03g00139 244 Coils Coil 36 56 - -
Bva03g00139 244 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 31 236 - -
Bva03g00139 244 Gene3D - 17 93 IPR023213 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva03g00139 Bva-Chr3 932037 933483 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00139 5 232 Monolignol Biosynthesis Gene Families AT5G48930 29.435 1.51e-30 115
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00139 K13065 - gmx:100819383 208.379