Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00128 ATGGACAGGCTCATAAGAGTAGACCCATCAAACGTTGTCCCAATCAGAGTTGAAGCCGGGCAGAAATGTCGGGGTATAATTACCTTGCGCAATGTTATGTACACCATGCCAGTGGCCTTCAGGCTTCAGCCACTGATAAAGACCCGTTACGCGGTGAAGCCTCAATCTGGAGTTATATCCCCTTTAGCCACAGTGACTATAGAGATCGTTTATCATCTCCCACAGGGATCTAATCTTCCACACTGCTTCCCTCGTTGCGATGACTCTTTCCTCTTGCACAGCGTTGTAGTCCCAGGTGCAGCCATTAAAGAGCCTTCATCAATGTTTGACTCTGTCCCCAGTGACTGGTTCACCACCAAAAAGAAGCAAGTTTTCATTGACAGTGGCATCAAAATCATGTTTGTGGGATCAACAATTTTGGCTCAATTAATTGCAGATGGGTCTATTGATGAAATCAGAGAAGTCCTGGAACGTAGTGACCCATCGTGGAAAGCAGCAGATTCATTGGACCCACAAGGCAAAACGTTGCTGCACTTGGCGATTGCTCAAAGCAGACCTGATCTTGTTCAATTACTCCTTGAATTTGAGGCCGATATAGAGGCTCCAGGTCGTTCTGGGTCAACTCCACTTGAGGTTGCTTCTTCCTCAGGCGAAAACTTAATAGCTGAGCTTCTATTGGCTCATAAGGCCAGCACAGAACGATCAGAGTCATCAAATTGGGGGCCAATTCACCTTGCAGCCAGAGCTGGACATGTAGACGTTCTGAGGCTACTCTTACTCAAAGGGACTAAAGTGGATGCTCTTACAAAAGATGGCAACACAGCCTTACACCTTGCGGTTGAGGAGAATAAGAGAGAATGCGTTAGGCTTCTGTTAGCGAACGGTGCCAGCACCTATATTCGAAACACCAGAGAAGGTGACACGCCTTTACACATAGCTGCAGCCATAGGCGAGGAACACATGGTCAAGCTATTGCTGCAGAAGGGTGCCAATAAAGATGTGAGAAACGGGTCGGCGAAAACTGCATACGACGTCGCAGCAGAGAACGGCCATACCCGTCTCTTCGATGCGCTTCGATTAGGGGACGATCTGTGCGTGGCTgcaagaaaaggagaaatcaGAACCATTCAGAAGCTGCTCGAGAATGGAGCAGCAATTAATGGGAGAGACCAACATGGGTGGACGGCACTGCACAGAGCTTCCTTCAAAGGGAGAATAGATGTGGTTCGAGCTCTGCTAGACAAAGGGGCCGATGTGGACGCTAAAGACGAAGATGGGTACACGGCATTGCATTGTGCCGTGGAATCAGGAAACGCGGATGTGACGGAGCTTTTGGTGAAGAGGAGAGCAGATGTCGAAGCCAGAACCAACAAGGGTGTGACACCGCTACAAATAGCAGAGTCGCTGCACTATGCTGGGATCACAAGGATACTCGTTAATGGCGGGGCTAGTCGGGAGAATTTGGGTCAGATTCCAGCTATGGCTACCACTCCATTTGGGAATAAGATGGAAACTGGGGGTATAAAGAAGAAATCTAGAAACAGAGGGATTCGAACAAGCTTTGATCGAAAATCAGCGGCTTTGGCATTGCTTTA 1595 0.4796 MDRLIRVDPSNVVPIRVEAGQKCRGIITLRNVMYTMPVAFRLQPLIKTRYAVKPQSGVISPLATVTIEIVYHLPQGSNLPHCFPRCDDSFLLHSVVVPGAAIKEPSSMFDSVPSDWFTTKKKQVFIDSGIKIMFVGSTILAQLIADGSIDEIREVLERSDPSWKAADSLDPQGKTLLHLAIAQSRPDLVQLLLEFEADIEAPGRSGSTPLEVASSSGENLIAELLLAHKASTERSESSNWGPIHLAARAGHVDVLRLLLLKGTKVDALTKDGNTALHLAVEENKRECVRLLLANGASTYIRNTREGDTPLHIAAAIGEEHMVKLLLQKGANKDVRNGSAKTAYDVAAENGHTRLFDALRLGDDLCVAARKGEIRTIQKLLENGAAINGRDQHGWTALHRASFKGRIDVVRALLDKGADVDAKDEDGYTALHCAVESGNADVTELLVKRRADVEARTNKGVTPLQIAESLHYAGITRILVNGGASRENLGQIPAMATTPFGNKMETGGIKKKSRNRGIRTSFDRKSAALALL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Bva03g00128 531 Gene3D - 134 302 IPR036770 -
Bva03g00128 531 Gene3D - 362 429 IPR036770 -
Bva03g00128 531 Pfam MSP (Major sperm protein) domain 5 108 IPR000535 -
Bva03g00128 531 SMART ANK_2a 238 267 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 305 334 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 392 421 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 349 388 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 172 201 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 271 300 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 205 234 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 425 454 IPR002110 GO:0005515
Bva03g00128 531 SMART ANK_2a 458 487 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
Bva03g00128 531 Gene3D Immunoglobulins 1 125 IPR013783 -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 238 270 IPR002110 GO:0005515
Bva03g00128 531 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 529 - -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Bva03g00128 531 Gene3D - 430 480 IPR036770 -
Bva03g00128 531 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Bva03g00128 531 PRINTS Ankyrin repeat signature 408 422 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 172 201 - -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Bva03g00128 531 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 529 - -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Bva03g00128 531 Pfam Ankyrin repeats (3 copies) 160 231 IPR002110 GO:0005515
Bva03g00128 531 Pfam Ankyrin repeats (3 copies) 346 423 IPR002110 GO:0005515
Bva03g00128 531 Pfam Ankyrin repeats (3 copies) 239 300 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat region circular profile. 238 267 - -
Bva03g00128 531 Gene3D - 303 361 IPR036770 -
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Bva03g00128 531 SUPERFAMILY PapD-like 2 149 IPR008962 -
Bva03g00128 531 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Bva03g00128 531 SUPERFAMILY Ankyrin repeat 167 487 IPR036770 -
Bva03g00128 531 Pfam Ankyrin repeat 425 457 IPR002110 GO:0005515
Bva03g00128 531 Pfam Ankyrin repeat 306 335 IPR002110 GO:0005515
Bva03g00128 531 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00128 Bva-Chr3 875431 877819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00128 364 468 Ion Channels AT4G32500 31.429 1.50e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00128 - - jre:108997887 790.415