Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00119 ATGGCAAAAGAACTCCATCCTTCAAAGTTTCTGGTTTtggttataattttactctctaTCTGTGATTCAGAGCAACTGCAGTCCTCTCAGTCTCAGGCCCTTCTGAGAATTCAAGGGCTTCTGAACTTTCCTGCTATTTTAAGCAGTTGGGATAACAACACAGACTTCTGCAACACTGAACCAAATCCATCTGTGACAGTTGTATGCTACGAAGACACCATAACCCAGTTGCATATAATAGGCAAAAAGAAAGCTCCTCTACTTCCTAAGAATTTCTCAATAGATTCCTTTGTCACAACACTGGTTAAACTTCCCACTTTGAAAGTCCTCTCGCTTGTCTCACTTGGTATATGGGGTTCATTGCCTGGCAAAATTTCTCGTTTGTCATCACTGGAAATACTCAATATGAGTTCCAATTTTCTATATGGAGGCTTCCCCCATGAGTTTTCATTACTATCAAGTCTTCACACATTAATTCTTGATGACAACATGTTCTCTGGTCGGCTTCCGAATTGGCTAGATTCACTTGCAGGCTTAATTGTTCTgagtttgaaaaataatttgttcaaTGGGTCTTTGCCAAATTCATTGGGAAGCTTGGAAACTCTGAGAGTTCTTTCACTTTCTCATAATCACTTTTATGGAGAGGTACCTGATCTTAGCCGCTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCAATTTCCTCGTCTTGGTGACAAGTTGGTCACTCTTACATTAAGCAACAATAAGTTCAGGTCTGGTATCCCTGCTGAAGTGAGCTCCTATTACCAACTGGAAAGACTtgacatttcatcaaacacatTTGTGGGACCATTCCAGCCAGCATTGTTGTCTCTTCCTTCTATTACTTATCTGAATGTTTCTGGAAATAAACTCACAGGGATGATTTTTGAGAACCTCTCTTGTAATTCTGAACTTAAACAAGTTGATTTATCTTCAAATCTTTTGACTGGCAGCTTACCTAAATGTCTGCTCTCGGATTCCAATGATGGAACTGTCCAGTATGCTAAAAATTGTCTAGAGGCTACGGACCAGTATCAGCAACCACCACCATTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAACGAGTTTCTAAGGTGCTCATTTCCCTTGGCGTAGTAGGTGGGGCTCTTGGAGTAGTAGCACTTGCTGCACTCGCTTTCTTCCTTATAAGAAAAAGAGGGAATGCCAGAAACAAAACTAAGAATCCTCCAACGAGGTTAATATCAGAGAACGCTGCTTCTGGATACACCTCTAAATTGCTTTCTGATGCAAGGTATATATCTCAAACAATGAAAATGGGAACTGTTGGCTTGCCCACTTATCGAACTTATTCATTGGAAGAGATAGAGGTGGCTACAAACAACTTCGACACAGCTTCTTTCATGGGAGAAGGTCCCCATGGGCAGATATACAGAGGTCATCTGAGGAATGGTTCATTCGTTGCCATTAAATGTGTCAAAATGATAAAACGCTATAGCACTCAAAACTATATGCAGCAAATAGAGCTGATATCAAAACTTAGGCATCGTCATTTAGTGAGTGCTCTTGGACACTGCTTCGAATgttacttggatgattcaagTGTCAGCagaatatttcttatattcGAATACGTACCAAATGGCACACTCAAGAGCTGGATCTCTGGTGGGCATTCTAGACGATCGCTAAATTGGACCCATCGCATAGCAGCTGCAATTGGAGTAGCAAAGGGTATCCAGTTTTTGCATACAGGAATAGTCCCTGGTGTATATTCAAACAACCTCAAAATAACAGATGTATTATTGGATCAGAACTTTGTTGCAAAAATCTGCAGTTACAACCTACCTCTGTTATCTAACATGGGAAAGGTTGGacataaaatttcttccaGTGGATCCAAAAGTACTAATGGTAACAAAAGTGCAAAACTTGACGACAAGTCTGACATATACGACTTTGGAGTAATACTACTAGAAGTCATTCTGGGAAGGACAATAAAGTCAAGGAATGACGTGGATGCTTTAAGGGATCTGTTGCAAGCAAGTATAGTAGCTGATGAAGAAGCTCGGAGAGGCATTGTAGATGCAGCAGTTCGAAAGGCATGCTTGGATCAATCGCTGAAGACAATGATGGAGATATGCGTGAGGTGCCTGGTTAAAGAACCAGCTGATAGGCCCTCCATTGAGGATGTTCTGTGGAATTTGCAGTTTGCTGCTCAAGTCCAAGAAGCATGGCGAGGGGATTCTCAAAGTAGTGAGGGCTCTCCAGGCTCGCCTTTAGAACCTCGACGACTCACCTTGCATTA 2354 0.4002 MAKELHPSKFLVLVIILLSICDSEQLQSSQSQALLRIQGLLNFPAILSSWDNNTDFCNTEPNPSVTVVCYEDTITQLHIIGKKKAPLLPKNFSIDSFVTTLVKLPTLKVLSLVSLGIWGSLPGKISRLSSLEILNMSSNFLYGGFPHEFSLLSSLHTLILDDNMFSGRLPNWLDSLAGLIVLSLKNNLFNGSLPNSLGSLETLRVLSLSHNHFYGEVPDLSRLTNLQVLELDDNAFGPQFPRLGDKLVTLTLSNNKFRSGIPAEVSSYYQLERLDISSNTFVGPFQPALLSLPSITYLNVSGNKLTGMIFENLSCNSELKQVDLSSNLLTGSLPKCLLSDSNDGTVQYAKNCLEATDQYQQPPPFCHTEALAVGILPERKKHKRVSKVLISLGVVGGALGVVALAALAFFLIRKRGNARNKTKNPPTRLISENAASGYTSKLLSDARYISQTMKMGTVGLPTYRTYSLEEIEVATNNFDTASFMGEGPHGQIYRGHLRNGSFVAIKCVKMIKRYSTQNYMQQIELISKLRHRHLVSALGHCFECYLDDSSVSRIFLIFEYVPNGTLKSWISGGHSRRSLNWTHRIAAAIGVAKGIQFLHTGIVPGVYSNNLKITDVLLDQNFVAKICSYNLPLLSNMGKVGHKISSSGSKSTNGNKSAKLDDKSDIYDFGVILLEVILGRTIKSRNDVDALRDLLQASIVADEEARRGIVDAAVRKACLDQSLKTMMEICVRCLVKEPADRPSIEDVLWNLQFAAQVQEAWRGDSQSSEGSPGSPLEPRRLTLH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00119 784 MobiDBLite consensus disorder prediction 762 784 - -
Bva03g00119 784 Gene3D Phosphorylase Kinase; domain 1 449 560 - -
Bva03g00119 784 Gene3D Ribonuclease Inhibitor 27 242 IPR032675 -
Bva03g00119 784 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Bva03g00119 784 Gene3D Transferase(Phosphotransferase) domain 1 561 769 - -
Bva03g00119 784 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 772 - -
Bva03g00119 784 Pfam Protein tyrosine and serine/threonine kinase 483 748 IPR001245 GO:0004672|GO:0006468
Bva03g00119 784 SUPERFAMILY L domain-like 29 351 - -
Bva03g00119 784 ProSiteProfiles Protein kinase domain profile. 478 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00119 784 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 772 - -
Bva03g00119 784 Gene3D Ribonuclease Inhibitor 243 343 IPR032675 -
Bva03g00119 784 SUPERFAMILY Protein kinase-like (PK-like) 458 753 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00119 Bva-Chr3 831086 835337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00119 43 772 Miscellaneous Gene Families AT3G03770 65.714 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bva03g00119 PK_Tyr_Ser-Thr 9.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00119 - - gmx:100807539 1146.72