Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00118 ATGGCTGAGCCACAAGGTGATGATGGCACTTCTGGAGCCAGGCGGAAAGCAAAGCGCGCCACCGCGATGGTGGAAGCAGCGGCAGCAGCTCCATGCGGGGCATGCAAGTTTCTGAGGAGGAAGTGCATTAATGGATGTGTCTTTGCACCTCACTTTGGTACAGACCAGGGTGCAGCCCGGTTTGCTGCCGTGCACAAGGTGTTTGGTGCTAGCAATGTCTCCAAGCTATTGCTGCGCATTCCAGTAAACCACAGGCAAGATGCAGTGGTTACTATCTCATATGAGGCTCAGGCAAGGCTGTCCGATCCAGTTTATGGTTGTGTGTCCACCATACTTGCTTTGCAACAACAGGTTGCAGCTCTGCAAGCGGAGCTGACAATGGTGCAAACTCAGCTGATAAATAGTAGAATTGCATTTGCAAGTGCTTTTCAGAGCACGCAACAGCAACTGCAACACCAGCAGCCAAACATCAGCTACTCCAACAATTCATCTGCTTCCACTAACCTTATAAACATGAGGAGCTTCAACCCGAGTTTCGACCTTGCAATGGAGACAGCACCCTCATCCCAATGCTTGGAGCCAGTTCAACTCTCTCGGTTGTCCCAGGATGAGGAAGATGATGAGGGAGAAAGTAGGATTCCACAAGTCTTCAACCATGAGATACTCCACCGTTG 674 0.5074 MAEPQGDDGTSGARRKAKRATAMVEAAAAAPCGACKFLRRKCINGCVFAPHFGTDQGAARFAAVHKVFGASNVSKLLLRIPVNHRQDAVVTISYEAQARLSDPVYGCVSTILALQQQVAALQAELTMVQTQLINSRIAFASAFQSTQQQLQHQQPNISYSNNSSASTNLINMRSFNPSFDLAMETAPSSQCLEPVQLSRLSQDEEDDEGESRIPQVFNHEILHR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00118 224 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Bva03g00118 224 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 212 - -
Bva03g00118 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 13 212 - -
Bva03g00118 224 Coils Coil 111 131 - -
Bva03g00118 224 MobiDBLite consensus disorder prediction 199 224 - -
Bva03g00118 224 Pfam Lateral organ boundaries (LOB) domain 31 129 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00118 Bva-Chr3 826850 827606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00118 30 208 AS2 family AT3G03760 63.590 9.77e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva03g00118 LOB 1.3e-37 No_clan