Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00109 ATGGCAATCATTCAATTGCTCAATAAATTCTCAGCTTTGTCATCAGCGTCAGGTTCATCTAATACCCTTTTGAGAACGATCCTAGGATCCCCAATATTGGAATTTGCGGCAATCTGCGTCAATTTGACTCTGCTTCTTGTATTTCTATTTGTTGTGTCGGCGAGACAAATATTCGTACGTTTTGGTCGAGTTCGAATTAGAAAGGACAATACGATCAGCAATGCAAGCTCAATTCGCCACAGTATTGACGGAGAAATTCATGATGTTAAAATCGGTTCTGGTTACAAATTGTCAGTATTGTGTTGTTTCTATGTCCTCTTTGTGCAAGTTCTGGTGTTAGGATTTGATGGGGCTGCTTTAATTAGGAAAGCAAATAATGGCAAGGCTGTTGACTGGTCTGTCCTAGCTTTGCCAGCTGCACAGGGTTTAGCTTGGTTTATATTAAGCTTCTCGGCTTTGCATTGCAAATTCAAGCCGTCCGAGAAGTTTCCCCTTTTGCTGAGGGTTTGGTGGGTTTTGtcatttgtaatttgtttatgtaatttatatgTTGATGGGAGAGGATTTTGGGTGGAAAGTTCAAAGCATCTCAGTTCTCATGTTGTGGCAAATTTTGCTGTCACTCCAGTTCttgcctttttgttttttgttgcACTTAGGGGTGTTACTGGTATACAAGTTTGTAGAAACTCTGATCTTCAAGAGCCATTACTTCTTGAAGAAGAACCAGGGTGTCTCAAGGTTACTCCTTACAGTGATGCTGGGCTTTTTAGCTCGGTCACCCTTTCTTGGCTCAACCCACTTCTTTCCATTGGTTCCAAGAGACCGCTCGAGCTCAAGGACATTCCCCTTCTTGCACCAAAAGATCGATCCAAGACGAGTTTTAAAGTATTGAATTCCAACTGGGAGAGGTTGAAGTCTGAAAATCCCTCTAAGCAGCCTTCATTAGCTTGGGCAATTTTCAAGTCATTCTGGAAGGAGGCAGCTTGTAATGCCATATTTGTTGGTGTGAATACTATTGTCTCGTATGTAGGTCCCTACATGATCAGTTACTTTGTTGATTACTTGGGAGGTGTAGAGACTTCCCCTCGTAAGGGGTACATCCTGGCTGGGATATTCTTTGCTGCCAAGCTTACGGAGACCTTGACGACTCGGCAATGGTACCTGGGGGTTGACATCTTGGGTATGCATGTTAGGTCAGCTCTAACGGCAATGGTTTATCGGAAGGGACTCAGGTTGTCAAGCTTGTCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAACTACATGGCTGTTGATGTTCAGAGAGTTGGAGACTACTCTTGGTATCTCCATGACATATGGGTCCTTCCTCTGCAAATTGTTCTTGCCCTTATGATTTTGTATAAGAACATTGGAATTGCTTTTATTGCGACATTGATTGCTACAATCATTTCCATTGTTGTCACCATTCCTGTGGCTCAGgtacaagaaaattttcaagacaAACTAATGACGGCTAAGGatgaaagaatgagaaaaacaTCTGAGTGTCTGAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGATAGGTATCGAATGGAACTGGAGGATATGCGTGGAGTAGAGTTCAAGTGGCTTCGCAAAGCTCTCTATTCTCAGGCTTTCattactttcttcttctggaGCTCCCCTATATTTGTTTCAGCTGTCACTTTTGCTACTTGCATATTGTTGGGTGGTAAGCTGACAGCAGGCGGTGTTCTTTCTGCTTTGGCTACTTTCAGAATCCTCCAAGAACCTCTTAGGAATTTTCCTGACTTGGTATCAACGATGGCTCAGACAAAAGTTTCTCTTGATCGCATATCTAGTTTCCTGCAGGAGGAAGAATTGCAGGAAGATGCAACTATCATCTTGCCACGTGGCATCTCTAACATTGCCATAGAGATTAAAGATGGAGTATTCTGCTGGGACCATTCTTCTTCTAGGCCTACTCTATCTGGGATACAGATGAAAGTGGAGAGGGGTATGCGTGTGGCGGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGTTTCCTTTCCTGTATCCTTGGCGAAATTCCCAAGCTTTCTGGTGAAGTAAGAGTGTGTGGCTCTGCTGCATATGTGCCGCAATCTGCATGGATACAGTCTGgaaatatagaagaaaatatcctATTTGGAAGCCCGATGGACAAAGCGAAGTACAAGAAGGTTCTTCATGCTTGTTCCCTGAAAAAGGACCTGGAACTTTTCTCACATGGAGACCAGACAATTATCGGTGATAGAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTGCAGCTTGCACGAGCACTTTACCAAGATGCTGATATTTATCTCCTCGATGATCCATTCAGTGCGGTTGATGCCCACACTGGATCAGAATTGTTTAGGGAGTACATATTGACGGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATTTAATACTGGTTCTTAAAGAAGGTTGCATCATACAGGCGGGAAAATATGATGATCTTTTGCAAGCGGGAACTGATTTTAAAACTCTAGTTTCAGCTCATCATGAAGCAATAGAGGCTATGGATATTCCTAATCACTCCTCAGAAGATTCAGATGGTTTTTTGGACGGATCTGTTATATCCAATAAATCCATTTCATCTGCAAATGATATTGACAGCTTGGCAAAGGACGTGCAAGAGGGTACATCAGCTTTAGATAAGAAAGCAattaaggagaagaaaaaagcaaaacgCTCAAGAAAGAAACAGCTGGTTCAGGAAGAGGAGAGGGTAAGAGGTCGAGTCAGTATGAAGGTGTACTTGTCATACATGGCTGCGGCATATAAAGGCTTGTTGATTCCACTTATAATTATTGCGCAAGCATTATTTCAGTTCCTTCAAATTGCTAGTAATTGGTGGATGGCTTGGGCGAACCCTCAAACAGAAGGAGATCAACCCAAAGCAACCCCTAtggttcttcttcttgtttacATGGCCCTTGCTTTTGGAAGCTCttggtttatatttattagggCTGTTCTGGTAGCTACATTTGGTCTAGCAGCTGCACAGAAGCTATTTTTAAAGATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCTACTCCAGCCGGAAGGATCTTGAATCGGGTATCAGTTGATCAAAGTGTTGTGGATATTGACATTCCTTTTAGACTTGGTGGGTTTGCTTCAACAACGATACAACTTATTGGCATTGTTGGTGTAATGACAGAAGTTACGTGGCAAGTTTTGCTTCTAGTTGTCCCTATGGCTATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGAATTGTAAGCATACAAAAATCTCcaattataaatctttttgCTGAGTCAATTGCTGGAGCAGCTACCATCCGAGGTTTCGGACAAGAAAAAAGGTTCATGAAGAGGAACATGTATCTTCTGGATTGTTTTGCACGCCCATTCTTCTGCAGTCTTGCGGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTGTCAACCTTTGTATTTGCTTTCTGCATGATTTTACTAGTGAGCTTACCGCATGGAAGTATTGACCCTAGCATGGCTGGACTGGCTGTGACATATGGCCTGAACTTAAATGCACGCTTATCACGGTGGATACTAAGCTTTTGCAagcttgaaaataaaataatttctattgaAAGGATCTATCAGTACAGCCAAATTCCTAGTGAAGCTCCAGCAATTATTGAAGATTCTCGCCCCCCATCCACATGGCCTGAGAACGGGacaattgaaataattgatttgaagGTTCGTTACAAGGAGAACCTTCCTATGGTGCTTCATGGAGTATCGTGTACATTTCCTGGTGGGAAAAAGATTGGAATAGTTGGACGTACTGGGAGTGGGAAATCAACTCTGATTCAGGCATTATTTCGTTTGATTGAACCATCAAGTGGAAGTATCCTTATAGACAGCATTGATATTTCAACAATTGGTCTTCATGACCTTCGTAGCCGTCTCAGTATTATACCACAAGAACCAACCTTATTCGAAGGTACCATACGAGGCAATCTTGATCCCCTGGAAGAGCACTCAGATAAGGAGATTTGGGAGGCTCTAGATAAGTCTCAGCTTGTAGAGATTATCcgtcagaaagaccaaaagctTGATACACGAGTGCTAGAAAATGGAGATAATTGGAGTGTCGGGCAGCGGCAACTTGTTTCCCTGGGTCGAGCTTTACTAAAGCAGTCCAGGATACTTGTGCTTGATGAAGCAACAGCATCAGTTGATACAGCCACTGACAATCTCATCCAGAAGATTATTCGAACAGAATTCAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTGGTTCTGGTACTAAGTGATGGCCGAGTTGCAGAATTTGACACTCCCTTACGGCTATTAGAAGATAAGTCCTCCATGTTTCTAAAATTGGTGACTGAGTACTCATCCCGTTCAAGTGGCATGCcagatttttg 4595 0.4085 MAIIQLLNKFSALSSASGSSNTLLRTILGSPILEFAAICVNLTLLLVFLFVVSARQIFVRFGRVRIRKDNTISNASSIRHSIDGEIHDVKIGSGYKLSVLCCFYVLFVQVLVLGFDGAALIRKANNGKAVDWSVLALPAAQGLAWFILSFSALHCKFKPSEKFPLLLRVWWVLSFVICLCNLYVDGRGFWVESSKHLSSHVVANFAVTPVLAFLFFVALRGVTGIQVCRNSDLQEPLLLEEEPGCLKVTPYSDAGLFSSVTLSWLNPLLSIGSKRPLELKDIPLLAPKDRSKTSFKVLNSNWERLKSENPSKQPSLAWAIFKSFWKEAACNAIFVGVNTIVSYVGPYMISYFVDYLGGVETSPRKGYILAGIFFAAKLTETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLSKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWVLPLQIVLALMILYKNIGIAFIATLIATIISIVVTIPVAQVQENFQDKLMTAKDERMRKTSECLRNMRILKLQAWEDRYRMELEDMRGVEFKWLRKALYSQAFITFFFWSSPIFVSAVTFATCILLGGKLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLQEEELQEDATIILPRGISNIAIEIKDGVFCWDHSSSRPTLSGIQMKVERGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSAAYVPQSAWIQSGNIEENILFGSPMDKAKYKKVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALADKTVIFVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNHSSEDSDGFLDGSVISNKSISSANDIDSLAKDVQEGTSALDKKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKATPMVLLLVYMALAFGSSWFIFIRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDIDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFAESIAGAATIRGFGQEKRFMKRNMYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSLPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDSRPPSTWPENGTIEIIDLKVRYKENLPMVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPSSGSILIDSIDISTIGLHDLRSRLSIIPQEPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLVEIIRQKDQKLDTRVLENGDNWSVGQRQLVSLGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGMPDF 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00109 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g00109 1531 Gene3D - 638 871 IPR027417 -
Bva03g00109 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Bva03g00109 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 865 IPR027417 -
Bva03g00109 1531 Pfam ABC transporter 661 795 IPR003439 GO:0005524
Bva03g00109 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1285 1519 IPR003439 GO:0005524
Bva03g00109 1531 SMART AAA_5 670 851 IPR003593 -
Bva03g00109 1531 SMART AAA_5 1311 1496 IPR003593 -
Bva03g00109 1531 CDD ABC_6TM_ABCC_D2 966 1260 IPR044726 GO:0140359
Bva03g00109 1531 Pfam ABC transporter 1302 1450 IPR003439 GO:0005524
Bva03g00109 1531 Gene3D - 1268 1521 IPR027417 -
Bva03g00109 1531 Coils Coil 920 943 - -
Bva03g00109 1531 Pfam ABC transporter transmembrane region 968 1212 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g00109 1531 Pfam ABC transporter transmembrane region 333 597 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g00109 1531 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Bva03g00109 1531 SUPERFAMILY ABC transporter transmembrane region 965 1265 IPR036640 GO:0005524|GO:0016021
Bva03g00109 1531 SUPERFAMILY ABC transporter transmembrane region 318 625 IPR036640 GO:0005524|GO:0016021
Bva03g00109 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 81 1531 - -
Bva03g00109 1531 CDD ABCC_MRP_domain2 1283 1503 - -
Bva03g00109 1531 Gene3D ABC transporter type 1, transmembrane domain 927 1266 IPR036640 GO:0005524|GO:0016021
Bva03g00109 1531 Gene3D ABC transporter type 1, transmembrane domain 299 626 IPR036640 GO:0005524|GO:0016021
Bva03g00109 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 609 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g00109 1531 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 81 1531 - -
Bva03g00109 1531 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Bva03g00109 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1275 1514 IPR027417 -
Bva03g00109 1531 CDD ABCC_MRP_domain1 643 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00109 Bva-Chr3 792214 799422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00109 643 859 Calmodulin-binding Proteins AT2G36910 30.932 3.08e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00109 - - tcc:18613052 2557.71