Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00099 ATGGCCCTGTGGATAGACAAGGGTTCTGAGCCCTTGACCCAAGCCGAAAAAGACGACCTTGATGCTATTGCTGCAATTAAAGAGTCTGCTGCTAGTGAACTTAAGGAGAAGGGCAACCAATATGTCAAGATGGGTAAAAAGCATTATCCTGTTGCTATTGATTGTTACACAAGGGCAATAAATCAGAAAGCCTTAAGTGATTCTGAGACGTCGATTCTTTTTGCAAATAGAGCCCATGTAAATTTGCTGCTTGGAAATTATAGGCGTGCTCTGACAGACACCGAGGAGGCAATTAAGTTGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCTAAAGCATCTCTTTCGCTAAATTTGTTGGCTGAAGCGCATTCTCATTGTCAAAACGGTCTTGGACTGGATACCAGTAATGAGGAATTGAAGAAGCTTGGCCGGCAGATTGATGCTAAGATATCAGAGCACAAACAGCATGAGGCTCAAGTCTCCAAAGCTCTTGCTGAGACCAAgGATCTTGTCTCCGCAATTGAAAATAGAGGATTGAAGATTGGAAAGGCAATGTTTCGAGAACTTACGGGATTGAAAAAGCCagtattggacaaaaataatattcttcacTGGCCTGTTCTTCTTCTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTCAGCCACTGCCATGGGATGacaaaaacaattacaaacgtgaatttgttgaattatatTATGAGGCTGGTTCTGGAGTTCCCTtatcaaagacaaaatttcTCCATTGTCTGTTAGAGGGTACTGCAGCTTCTCAGAGGGAAGGTGTAGGTAATGAAGACAGAGACACAGATGAGGATATTAACCGCATCACAGgCTCTTCTAAATGGATCAAGGTTAGCGAAAGGAGGACGCTCCATGATGTATTGAGAGAACCAAACTTCATTATTCCTGGGATCCCAGTATTCTATGTCGTTTCAAAGCAGTCCAGCTTTTATGGCAAATTCAAATCTGGAAAATGGGCTGCTCCAAGTATATG 1034 0.3994 MALWIDKGSEPLTQAEKDDLDAIAAIKESAASELKEKGNQYVKMGKKHYPVAIDCYTRAINQKALSDSETSILFANRAHVNLLLGNYRRALTDTEEAIKLCPSNIKAIYRAAKASLSLNLLAEAHSHCQNGLGLDTSNEELKKLGRQIDAKISEHKQHEAQVSKALAETKDLVSAIENRGLKIGKAMFRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCQPLPWDDKNNYKREFVELYYEAGSGVPLSKTKFLHCLLEGTAASQREGVGNEDRDTDEDINRITGSSKWIKVSERRTLHDVLREPNFIIPGIPVFYVVSKQSSFYGKFKSGKWAAPSI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00099 344 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Bva03g00099 344 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Bva03g00099 344 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 340 - -
Bva03g00099 344 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 340 - -
Bva03g00099 344 SUPERFAMILY TPR-like 21 160 IPR011990 GO:0005515
Bva03g00099 344 Coils Coil 134 161 - -
Bva03g00099 344 SMART tpr_5 105 138 IPR019734 GO:0005515
Bva03g00099 344 SMART tpr_5 31 66 IPR019734 GO:0005515
Bva03g00099 344 SMART tpr_5 71 104 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00099 16 161 Calmodulin-binding Proteins AT3G25230 29.936 3.28e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00099 K24927 - gmx:100783179 529.635