Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00097 ATGGCTACTCAAGGTCAAGTCATTACCTGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGCCATTGGCGATAGAAGACGTTCAGGTGGCTCCGCCACAGGCTGGGGAAGTTAGAATCCAAATCTTGTTTACTGCTCTCTGTCACACCGATGCTTATACCTGGGGCGGCAAGGATCCGGAAGGTCTCTTCCCATGTATTCTTGGTCATGAAGCTGCCGGGATTGTAGAAAGTGTTGGAGAAGGTGTTACAGAAGTTCAGCCCGGAGATCATGTCATCCCTTGTTACCAGGCTGAATGCAAAGAATGTAAGTTTTGCAGATCTGGCAAAACAAACCTTTGTGGCAAAGTTCGTTCTGCCACTGGAGTTGGGGTTATGCTGAGTGATCGCAAGAGCCGTTTCTCTATTAATGGAAAGCCTATCTATCATTTTATGGGAACCTCAACGTTTAGCCAATACACTGTTGTTCACGATGTTAGTGTGGCTAAGATTGATCCAAAAGCTCCTCTGGAGAAAGTATGTCTTCTTGGATGCGGGGTCCCAACTGGCCTTGGAGCTGTATGGAACACTGCAAAGGTGGAACCGGGATCAATTGTTGCTGTTTTTGGACTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAGCTGCTGGAGCATCACGGGTTATTGGCATAGATATTGACAGCAAAAAGTTTGATACAGCAAAGAATTTTGGGGTCACCGAATTTATCAATCCAAAAGACCACGAGAAACCAATTCAACAAGTAATAGTTGATCAGACGGATGGTGGAGTTGACTATAGTTTTGAGTGCATTGGAAATGTCCAAGTGATGAGGTCCGCTTTGGAATGCTGCCATAAGGGTTGGGGGACATCAGTTATTGTGGGTGTTGCTGCATCAGGGCAGGAAATCTCAACTCGCCCTTTTCAATTGGTGACTGGCCGTGTCTGGAAGGGAACAGCTTTTGGTGGATTCAAGAGCCGTTCACAAGTGCCTTGGCTTGTAGACAAGTACTTGAAGAAGGAGATCAAGGTTGATGAGTACATTACCCACACTTTGACCCTTGCCGAGATCAACAAGGCATTTGATCTTATGCATGAAGGAGGATGTCTTCGTTGTGTGCTTGCGTTGTTCTA 1136 0.4683 MATQGQVITCKAAVAWEPNKPLAIEDVQVAPPQAGEVRIQILFTALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECKECKFCRSGKTNLCGKVRSATGVGVMLSDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDSKKFDTAKNFGVTEFINPKDHEKPIQQVIVDQTDGGVDYSFECIGNVQVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYLKKEIKVDEYITHTLTLAEINKAFDLMHEGGCLRCVLALF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00097 378 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Bva03g00097 378 SUPERFAMILY GroES-like 326 375 IPR011032 -
Bva03g00097 378 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bva03g00097 378 TIGRFAM adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 376 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bva03g00097 378 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Bva03g00097 378 Gene3D - 182 320 - -
Bva03g00097 378 CDD alcohol_DH_class_III 8 375 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bva03g00097 378 PANTHER ALCOHOL DEHYDROGENASE 3 376 - -
Bva03g00097 378 Gene3D - 13 372 - -
Bva03g00097 378 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 3 376 - -
Bva03g00097 378 SUPERFAMILY GroES-like 3 198 IPR011032 -
Bva03g00097 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 341 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00097 Bva-Chr3 730472 734132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00097 10 331 Monolignol Biosynthesis Gene Families AT1G72680 27.052 6.41e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00097 K00121 - qsu:111990884 729.169