Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00093 ATGCTTGCGGGCGACTGCTTTGCCGAAGTTTTAGCAGTCACTGGTTACTCCACGGCAAGGTTTTCGAGGTTGAAGGTGTTCGTTGCTTCTGAAGAtgatttttgtgaattttggtTTGGGCGAGAGAAAATGCCACTTCTGGTTATCTTCCTCCTTGCTCTTCTTAATTTGCTTTTCTCTTGCTCAGGTCATTCATTTTTGTCTACATATTTGTCTCCTTCTACAAGGCCATTTCAGACTTTATCTGTTGGAGGAATGCTAGTCGAACATGTGAAGTCAGTTTCTATGAGTGTATCATTTGCTTCATCAAAACGGGGCAAACTGTGGTTAATCAAGTCTTCTTTGGGACCTTCTTCTGCACCTGCACCTTCTCCTTCTAATCTagCTCCAATTGTGCCTCCAAGGCCTAGACATCATCGTCGTCGTCATCACAGTGCAAGACCTCATCTTGGTGCTCCACCCCCTTCTAAAGACCAAGCTTGCGACCAAACCTGTACAGAGCCATTCACACCAACTCCCTTTGGTTCACCTTGTGGCTGTGTATTTCCCATGAAAGTCACCCTTATACTGGATGTGGCTCCTTATTCTGTTTTCCCAGTAATGAATGAGTTAGAGATTGAGATTGCATCAGGCACATATTTGGATCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACAGTCAAAACCAGGGGAGAACTGTAGTTGATATTAACTTGGTTCCACTGGGGGAGAAATTTGACAATACCACTGCTGTTCTGATTTACGAGAGGTTTTGGCATAAGAAAGTTCCTCTAAACAGGGGCCTTTTTGGTGATTATTCAGTATCATACATTAGTTATCCAGGAATTCCATCATCACCACCATATGGAAGTTACATGGAAAATGCACCTCGTGGAAGTGCTGGTGGTCTTCCAGTTACTGCCAACTTTGTCAACAAGACCCAGAGAATGAACCTTAGAACCATAATCGTTATTGCTTTATCTGCATTTGTACTCTTGTTGGTTTTGGTTGGAGCATTTTCTGTCATCTTGAAATGGAGGAAGATTAAAAGGCCATCAAGTGCTGTTGGTCCTGCTTTCACATCGTCTATAAACAAGAGATCTGGTATTGGGTCTATGTTATCAAGCAGTATTACAAGCTCAACGTCCATGTCCCTTATGTCCACCATGGCTACTTCTATTCTCTCCGTTAAAACATTTACACTTTCTGAGCTTGAGAAAGCAACTGACAAGTTCAGCTCTAAGAGAGTTTTGGGTGAAGGAGGATTTGGACGTGTCTATCATGGCACATTAGAAGATGGAACTGAAGTTGCAGTTAAGTTGCTAACAAGGGACAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCACCACCGTAATCTTGTTAAACTCGTTGGTATATGCATTGAAGGGCGCAGACGGTGCTTAGTGTATGAACTTGTTCACAGTGGCAGTGTTGAGTCCCATTTACATGGTGCTGACAAGAAAAAGGGCCCTCTAGATTGGGAAGCACGTATGAAAATTGCCCTTGGAGCTGCTAGAGGGTTGGCTTATCTTCACGAGGATTCTAATCCTCGTGTAATTCACCGAGACTTTAAAGCTAGTAATGTCTTATTAGAAGATGACTTTACCCCCAAGGTCTCTGATTTTGGGATGGCCAGAGAAGCAACTGAGGGAAGTCATCATATTTCTACGCGAGTCATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACTGGCCATTTGCTTGTTAAAAGTGATGTTTATAGTTATGGAGTTGTGTTGCTTGAACTTCTCACTGGTAGAAAACCAGTGGACATGTCTCAACCTCCTGGACAAGAGAATCTAGTAACCTGGGCACGGCCACTCTTGACCACTAGAGAAGGTGTAGAGCAGCTGGTTGATCCATCTTTGGCCGGAAGTTACGACTTTGACGATATGGCAAAGGTGGCTGCCATTGCTTCAATGTGCGTCCACCCAGAGGTCACTCACAGACCATTCATGGGTGAAGTTGTGCAGGCTTTAAAGCTGATATACAACGACACAGATGAGACTTGTGGTGACTGCATCAGTCAGAAAGAATCTTCTGCTCATGACTCTGATTTTAGAGGCGATCTGGCCCCTTCTGATAGCAGTTGGTGGAATGCTGGAGGGTTAACCCCACGATTAACTTATGGTCAAGCATCATCGCTCATCACGATGGAATATAGTTCTGGTCCActtgaagaaatggaaaacAGACCGTTTTCAGCTTCAAGCTTGAACGGGGACGAGATATCTTTACCAATTTGGCATGGGAATAGATCAGGTCCCTTAAGAACAGTTCGAAGCAAGCTATCCTTATACAGATTTACAGGAAGTCGGAGTGAACATGGGGGACTTCCTTCGAAGCGTGTTTGGAATGATGGTTACTGGGTTTA 2450 0.4355 MLAGDCFAEVLAVTGYSTARFSRLKVFVASEDDFCEFWFGREKMPLLVIFLLALLNLLFSCSGHSFLSTYLSPSTRPFQTLSVGGMLVEHVKSVSMSVSFASSKRGKLWLIKSSLGPSSAPAPSPSNLAPIVPPRPRHHRRRHHSARPHLGAPPPSKDQACDQTCTEPFTPTPFGSPCGCVFPMKVTLILDVAPYSVFPVMNELEIEIASGTYLDQSQVKIMGATADSQNQGRTVVDINLVPLGEKFDNTTAVLIYERFWHKKVPLNRGLFGDYSVSYISYPGIPSSPPYGSYMENAPRGSAGGLPVTANFVNKTQRMNLRTIIVIALSAFVLLLVLVGAFSVILKWRKIKRPSSAVGPAFTSSINKRSGIGSMLSSSITSSTSMSLMSTMATSILSVKTFTLSELEKATDKFSSKRVLGEGGFGRVYHGTLEDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLVGICIEGRRRCLVYELVHSGSVESHLHGADKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGMAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTTREGVEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCGDCISQKESSAHDSDFRGDLAPSDSSWWNAGGLTPRLTYGQASSLITMEYSSGPLEEMENRPFSASSLNGDEISLPIWHGNRSGPLRTVRSKLSLYRFTGSRSEHGGLPSKRVWNDGYWV 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00093 816 Pfam Protein tyrosine and serine/threonine kinase 415 685 IPR001245 GO:0004672|GO:0006468
Bva03g00093 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Bva03g00093 816 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Bva03g00093 816 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00093 816 PANTHER OS01G0750732 PROTEIN 49 813 - -
Bva03g00093 816 CDD STKc_IRAK 419 688 - -
Bva03g00093 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 49 813 - -
Bva03g00093 816 Gene3D Transferase(Phosphotransferase) domain 1 489 710 - -
Bva03g00093 816 SUPERFAMILY Protein kinase-like (PK-like) 397 688 IPR011009 -
Bva03g00093 816 MobiDBLite consensus disorder prediction 117 164 - -
Bva03g00093 816 MobiDBLite consensus disorder prediction 134 148 - -
Bva03g00093 816 Gene3D Phosphorylase Kinase; domain 1 384 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00093 Bva-Chr3 703375 711095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00093 161 802 Receptor kinase-like Gene Family AT5G56890 53.778 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva03g00093 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00093 - - gmx:100792309 1178.31