Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00088 ATGGTGGGGGGTGAACCATTGCCAGAAGATTTTGATCTATCTTTGATAAAAGATACTGTGCCACCCGCAGTCTTAAGCAGTGATGAGGCCGAGGACAGTAATGAGAAAGTTAAAAGAGATATGGTACTAGGAAGGAAAGTGCATACCTCATGCCTGGAAGTTACAGAGCCTGAAGCTGACGACGAGGTTACTGGGGAAAGAGAAGCTTATATGGCCAGTGTGCTGGCTAGGTATAGAAAATCTCTCATAGAAAGGACGAAGCATCACTTAGGTTACCCTTGCAATTTGGATTCCGATTATGGTGCACTTGCTCAGCTGCAGCACTTTCCAATCAACAACCTTGGGGATCCTTTTATTGAAAGCAATTATGGTGTCCACTCAAAGCAGTTTGAAGTGGGTGTTCTGGATTGGTTTGCCCGTTTGTGGGAACTGGAGAAAAATGAATACTGGGGATATATAACGAATGGTGGCACAGAATGCAATCTCCATGGCATCCTAGTGGGAAGAGAGATTTTCCCAGATGGGATTCTATATGCCTCACTGGAGTCGCATTATTCTGTATTCAAAGCTGCTAGAATGTACAGGATGGAATGTGAGAAAGTGGAGACTCTTTGTTCTGGGAAAATTGATTGTGACGATTTCAAGGCCAAGCTTCTATGCCACAAGGACAAGCCAGCAATTATAAATGTTAATATAGGGACAACTGTTAAGGGAGCTGTGGATGATCTTGATTTGGTCATTCAGACACTGGAAGAAGCAGGATTTTCACATGACCGGTTCTACATTCACTGTGATGGAGCTTTGTTTGGTCTCATGATGCTTTTTGTCAAACACCTGCATCAGGCATGTGCACCAAAAGTTACTTTTAAGAGACCCATTGGAAGTGTGAGTGTCTCAGGGCACAAATTTCTGGGGTGCCCAATGCCGTGTGGTGTGCAGATAACAAGACTGGAGCACATCAATGCCCTCTCAATGAATGTAGAATACTTAGCTTCCATAGATGCTACAATTATGGGCAGCCGAAATGGGCATGCTTCCATATTTCTCTGGTATACCTTAAACCAGAAAGGGTACAAAGGTTTCCAGAAAGACGTACAGAAATGCTTGAAGAATGCACAGTACTTGAAAGACAGACTTGTAGATGCTGGCATTGGTGCAATGCTGAACGAGCTGAGCAGCACTGTTGTGTTTGAGCGACCACATGATGAAGAGTTCATGCGCAAGTGGCAATTGGCATGTCAAGGGAACATTGCACACGTGGTAGTGATGCCAAACATCACTGTTGAGAAGCTTGATGATTTCCTTGATGAGCTTCTGGAGAAGCGCAAGACATGGTTTTTGGATGGCAAGTGTCAACCTTATTGTATTGCATCAGATGTAGGTCAGCAAAATTGTCTGTGCACTGTGCACAAGTG 1415 0.441 MVGGEPLPEDFDLSLIKDTVPPAVLSSDEAEDSNEKVKRDMVLGRKVHTSCLEVTEPEADDEVTGEREAYMASVLARYRKSLIERTKHHLGYPCNLDSDYGALAQLQHFPINNLGDPFIESNYGVHSKQFEVGVLDWFARLWELEKNEYWGYITNGGTECNLHGILVGREIFPDGILYASLESHYSVFKAARMYRMECEKVETLCSGKIDCDDFKAKLLCHKDKPAIINVNIGTTVKGAVDDLDLVIQTLEEAGFSHDRFYIHCDGALFGLMMLFVKHLHQACAPKVTFKRPIGSVSVSGHKFLGCPMPCGVQITRLEHINALSMNVEYLASIDATIMGSRNGHASIFLWYTLNQKGYKGFQKDVQKCLKNAQYLKDRLVDAGIGAMLNELSSTVVFERPHDEEFMRKWQLACQGNIAHVVVMPNITVEKLDDFLDELLEKRKTWFLDGKCQPYCIASDVGQQNCLCTVHK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00088 471 PANTHER SERINE DECARBOXYLASE 5 471 - -
Bva03g00088 471 Gene3D - 123 342 IPR015421 GO:0003824
Bva03g00088 471 Gene3D Aspartate Aminotransferase, domain 1 347 443 IPR015422 GO:0003824
Bva03g00088 471 Pfam Pyridoxal-dependent decarboxylase conserved domain 175 390 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva03g00088 471 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 295 316 IPR021115 GO:0016831
Bva03g00088 471 PANTHER - 5 471 - -
Bva03g00088 471 SUPERFAMILY PLP-dependent transferases 83 442 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00088 Bva-Chr3 676549 678771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00088 189 377 Calmodulin-binding Proteins AT1G65960 25.000 2.33e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00088 K25193 - gmx:100795577 787.334