Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00082 ATGgctattgtttcttttatgccgcttatatttctttgttttttggtcaATCTTGTAACCCATGCCGCTGCTGAGCGCCAGTACCAAAACTGTGTAACTGAAAGAGGCAACTTCACCGCTAATGCAACCTACATGGCTAACCTCGATGCCCTTTTGGACAACCTCACTGCCAACACCCAAATTGACTATGGCTTCTACAACTTGTCTTACGGCCAAAATCCTGAAAAAGTCAGTGTAATTGGTCTGTGTAGGGGAGATTTGAACCCAGATGTTTGCCGTAGTTGTCTCAACAATTCCCGAGTGTTTCTCCCACAGTTTTGTCCAAATTATAAGGAAGCTATTGCATTCTATGAAAATTGCATGCTGCGCTACTCAAACCGATCAATATTTGGTGTGGTTGAAGATACTCCCTGGTATTATTATTGGTGGCCGGGAAATAATGTAACAAACGTGGATCAGTACAATCAAGTgctatttaagttgttgccaGAGTTACAAAGTAAAGCGGCATCTGGTGACAACCGTCTTAAGTATGCTGCAGGAAGTGCAACAGTTACGGACTCTTTAAGAATATATGCCCTTGTGCAGTGTACTCCTGATTTGTCAGAGCAACTATGTATTGACTGCTTGGGTGTGGCTTTCTCAGAAATCTCTTCCTGCTGTAATAGCGTTGCTGGTGTAACAATTGGAAGACCTAGCTGTAATGTCAGATATGGTACCAACCCATTCTATGAAGCTATACCTGACACACCAAAAGGAAACAGCAAACTACGAACGGTCATTGCCATAGTTGCGTCGGTTGTTGCCTTCATCATAGTAATTGTCTTAGTCTTCATCTATTTAAGAGTGAAAATGGCAAGGAAGTACATTGAAGGTGAAACAAAAGCAGAGGATGAAGAAATTGAACTTATTGACACATTGCAATTTGACTTTGACGCCATCGTAGTTGCTACAAATAACTTTTCTGATGAAAATAAGCTAGGGCAAGGTGGTTTTGGTGTTGTTTACAAGGGTAGGCTCTCCAATGGACAAGAAGTTGCTGTCAAAAGGCTATCGAAGGAATCTGTTCAAGGAGATGTAGAATTTAAGAATGAAGTATTGTTAGTGGCCAAGCTACAACACCGAAATTTAGTTAGGCTGCTTGGTTTttgtttggaaagaaaagaaagacttGAAAGGCTACTCATCTATGAGTTTATTCCCAACAAAAGCCTTGATTACTTCATATTTGATCCAATACAACGTTTTTATTTAGATTGGCAAAGGCGATTCAAAATCATAGAAGGCATTGCTAGAGGCTTTCTTTATCTTCATGAGGATTCTCGACTGCGAATTATTCATCGTGACCTCACAGCAAGCAACATTCTTTTAAATGAAGAGATGAACCCTAAAATAGCAGATTTTGGCATGGCAAGATTATTTCAAATGGATCAATCtcaagaaaatacaaatagaATTGTTGGAACCCATGGATACATGGCACCTGAATATGTTGCGTGTGGATACTTTTCAATGAAGTCAAATGTCTTTAGTTTTGGTGTATTGATCTTAGAGATTATTAGTGGACTCAAAAATAGTGAAATTCGAGATAGCGAGTATGTAGAACATTTAGTAAGCTTTGTAATGTGGAGAAAGTGGAATGAAGGAACAGCCTTAGACATTGTAGATTCCACTTTGAGTGGTGCttcaacaaatgaaataatgagATGCATCCACATTGGATTACTCTGTGTTCAAAAAGATGTGGCGAACAGACCTACAATGGCTTCGGTAATGCTCATGCTTAACAGCAATTCTGCCACTCTTCCAAAACCATCAGAACCTGCATTTGTTCTGCAAGGAAGAACTTTCACAGGAACACAGTTGCTGGAGCGAAACTCAGGGTTGGTTGAAACTGCAATCAATAATGTTCAAGCATCTGTAAATGAGGCCTCGAATACTGAGCTATACCCTCGATA 1958 0.3779 MAIVSFMPLIFLCFLVNLVTHAAAERQYQNCVTERGNFTANATYMANLDALLDNLTANTQIDYGFYNLSYGQNPEKVSVIGLCRGDLNPDVCRSCLNNSRVFLPQFCPNYKEAIAFYENCMLRYSNRSIFGVVEDTPWYYYWWPGNNVTNVDQYNQVLFKLLPELQSKAASGDNRLKYAAGSATVTDSLRIYALVQCTPDLSEQLCIDCLGVAFSEISSCCNSVAGVTIGRPSCNVRYGTNPFYEAIPDTPKGNSKLRTVIAIVASVVAFIIVIVLVFIYLRVKMARKYIEGETKAEDEEIELIDTLQFDFDAIVVATNNFSDENKLGQGGFGVVYKGRLSNGQEVAVKRLSKESVQGDVEFKNEVLLVAKLQHRNLVRLLGFCLERKERLERLLIYEFIPNKSLDYFIFDPIQRFYLDWQRRFKIIEGIARGFLYLHEDSRLRIIHRDLTASNILLNEEMNPKIADFGMARLFQMDQSQENTNRIVGTHGYMAPEYVACGYFSMKSNVFSFGVLILEIISGLKNSEIRDSEYVEHLVSFVMWRKWNEGTALDIVDSTLSGASTNEIMRCIHIGLLCVQKDVANRPTMASVMLMLNSNSATLPKPSEPAFVLQGRTFTGTQLLERNSGLVETAINNVQASVNEASNTELYPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00082 652 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Bva03g00082 652 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Bva03g00082 652 ProSiteProfiles Protein kinase domain profile. 321 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00082 652 Pfam Protein tyrosine and serine/threonine kinase 324 592 IPR001245 GO:0004672|GO:0006468
Bva03g00082 652 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 628 - -
Bva03g00082 652 Gene3D Phosphorylase Kinase; domain 1 283 399 - -
Bva03g00082 652 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Bva03g00082 652 Gene3D Transferase(Phosphotransferase) domain 1 400 605 - -
Bva03g00082 652 SUPERFAMILY Protein kinase-like (PK-like) 307 620 IPR011009 -
Bva03g00082 652 Gene3D - 24 128 IPR038408 -
Bva03g00082 652 Gene3D - 136 243 IPR038408 -
Bva03g00082 652 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 628 - -
Bva03g00082 652 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Bva03g00082 652 ProSitePatterns Tyrosine protein kinases specific active-site signature. 445 457 IPR008266 GO:0004672|GO:0006468
Bva03g00082 652 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00082 Bva-Chr3 618413 621055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00082 9 652 Receptor kinase-like Gene Family AT4G21410 47.162 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva03g00082 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00082 - - gmx:113000773 710.294