Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00076 ATGACGTTTTTGGCGGTGCATAAGGTTGTTGAAACGAGGAAGGTGTTAGTTGGAATCGAAATTGATAGCCATAGCAGACAGCTTCTGAACTGGGCTCTCGTCAAAGTTGCCGAACCTGGAGATTGCGTTATTGCAATCCATGTTGTCAGAAATCCTGATCATGTTTCCAAGAGCAAGCTTCTGTTGGAGAATTACTTAGATGTTTATGAGGGTCTATGCAATGTGAAAAAGGTAAATCTCACGGGAAAGATCTTCACAGGAAGCAAAATTAGAAGCATTCTTGTTAGAGAGGCAAAGAACCATGCTGCTCTTGCTCTGGTTGTGGGGACAAGCAAACATAGTCTTGGGCGCCGAGCTTCCACGGCAAAATATTGTGCCAAACGACTGCCACCAACCATCAACGTTCTGGCTATCCAAGAtgggaaaattttcttcagaAGGTGCACCAGTAATCAACTAACAGGCCTTATACAAGATCCAAGACCAAGCCTTTCATGCATAGATAGCCGCAGTGAGAAAGAAATCCCACCTGAATATGGTGACTCCGAGGCAGATGCAGAGGAATCAATACTTGAAGCTGAAGTTACCATGAATTTGAAGGCAGAAACATTTAATGGCAAAGGAAGAAGCACAAATTTGTCCTTAAGATCAATGTCTTTGTTTATCGGAGACCCTTCAGAGCACAAGCTTGGATGGCCCCTGCTCCGGAGAGCTAGTTCGGGAACCCCAACAACCCTTCATGCAAGGGAAATGTCTGTGGTGCAATGGGTTATGAGCTTACCAGATCGCTCGCCACGGAAATGTCCTTGCTCTTCATTCATGGAAGAAAACCCAACAGAAACAAGTCTTAGTGACATTGAGGATGTGAGCCCAAAAAACTTGGATGggattttgaatataaattcatCTAATTGTAAATGGTTCAGCCTTGAAGCTCTTAAGTCTTGGACTTGTGAATTCTCTTCAGGAAATCTGATTGGAAAAGGAGGGAGTAATCGTGTATTCAGAGGAGTTCTTCCTAATCTGAAGCCCATCGCGGTCAAAGTTTTGAAATCATCAAAAGAAGCGTGGAAAGATTTTGCTCTTGAAGTGGAAATAATAACCTCATTGAACCACAAAAGCATCACCCCTTTACTTGGGCTTTGCATCGAAGACAATTCTTTAATATCTGTTTATGATTTCTTCCACAAAGGAAGTTTAGAAGAAAACTTACACGGTAAAAGCAAGGATGGATGCATTTTGCCATGGGAAGCAAGATTCAGCATAGCCGTTGGGATAGCCGAAGCCCTTAATTACCTACACAATGAAACCTTGAAGCCTGTTATACACAGAGATGTCAAGTCttcaaatattcttctttcCCGTGGGTTTAAACCACATTTGTCAGATTTTGGACTTGCAATTTGGGGACCAACAACCTCATCTTTTTTGACACAAGAAGATGTAGTGGGAACATTTGGTTATCTTGCTCCTGAATATTTCATGTATGGGAAGGTGAGCGACAAGATAGATGTCTACGCCTTCGGTGTGGTTGTACTTGAACTGATAACAGGAAGGAAAGCCATCAGCCCTGAGACTTCAAAAGCACAGCAAAGCTTAGTGGTGTGGGCAAAACCATTAATGGAGAATGGGGATCTTATAGGCTTATTGGACCCAAATTTACAAGGCAagtttgatgaaattcaaCTGCACAGAATGGTTCTAGCAGCATCCCTATGCACCACACGGGCAGCTCGACTTCGTCCAAAAATGAATCAGATACTGAACATCCTAAAAGGAGATGAAAAGGTTGAACATCTTTTAAACTCAAACGGGTATGATCATCAATATTCAGCAAACCAAGACAACATTGATGATGAAGTGTATCCCAATTCAAGTGCAGAGCTGCACCTTAGTCTTGCATTACTTGATGTTGATGATGAAACCACGTCGTCTAGTAGTACGGACCAAAGCAGCAGTCTCTCCTTAGAACAACAATTGAAAGAGCGATCGAGTAGATCATCCAGTTTTAATTA 2015 0.4124 MTFLAVHKVVETRKVLVGIEIDSHSRQLLNWALVKVAEPGDCVIAIHVVRNPDHVSKSKLLLENYLDVYEGLCNVKKVNLTGKIFTGSKIRSILVREAKNHAALALVVGTSKHSLGRRASTAKYCAKRLPPTINVLAIQDGKIFFRRCTSNQLTGLIQDPRPSLSCIDSRSEKEIPPEYGDSEADAEESILEAEVTMNLKAETFNGKGRSTNLSLRSMSLFIGDPSEHKLGWPLLRRASSGTPTTLHAREMSVVQWVMSLPDRSPRKCPCSSFMEENPTETSLSDIEDVSPKNLDGILNINSSNCKWFSLEALKSWTCEFSSGNLIGKGGSNRVFRGVLPNLKPIAVKVLKSSKEAWKDFALEVEIITSLNHKSITPLLGLCIEDNSLISVYDFFHKGSLEENLHGKSKDGCILPWEARFSIAVGIAEALNYLHNETLKPVIHRDVKSSNILLSRGFKPHLSDFGLAIWGPTTSSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVVLELITGRKAISPETSKAQQSLVVWAKPLMENGDLIGLLDPNLQGKFDEIQLHRMVLAASLCTTRAARLRPKMNQILNILKGDEKVEHLLNSNGYDHQYSANQDNIDDEVYPNSSAELHLSLALLDVDDETTSSSSTDQSSSLSLEQQLKERSSRSSSFN 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00076 671 Pfam Universal stress protein family 13 130 IPR006016 -
Bva03g00076 671 Pfam Protein kinase domain 322 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00076 671 CDD USP_Like 14 130 - -
Bva03g00076 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Bva03g00076 671 Gene3D HUPs 4 138 IPR014729 -
Bva03g00076 671 ProSiteProfiles Protein kinase domain profile. 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00076 671 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 138 - -
Bva03g00076 671 PANTHER OS01G0253100 PROTEIN 11 665 IPR045271 GO:0004714|GO:0006468
Bva03g00076 671 Gene3D Phosphorylase Kinase; domain 1 284 394 - -
Bva03g00076 671 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 665 - -
Bva03g00076 671 SMART serkin_6 320 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00076 671 Gene3D Transferase(Phosphotransferase) domain 1 395 607 - -
Bva03g00076 671 MobiDBLite consensus disorder prediction 640 671 - -
Bva03g00076 671 SUPERFAMILY Protein kinase-like (PK-like) 301 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00076 Bva-Chr3 572327 576516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00076 300 618 Trihelix Transcription Factor Family AT1G70460 38.650 7.74e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva03g00076 Pkinase 3.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00076 - - lang:109355495 850.892