Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00070 ATGTCGAAGGAAGTGAGTGAAGAAGGGCAAACCCTCCACGGAAAAGACTACGTAGACCCACCACCAGTTCCTCTCATCGACGTTGCTGAGCTCAAGCTCTGGTCTTTTTACAGAGCTCTCATCGCAGAGTTCATAGCCACCCTTCTCTTCCTCTACATAACCGTCGCCACCGTCATCGGCCACAAGAAGCAAACAGGGCCATGCGACGGCGTCGGTCTTCTGGGCATCGCTTGGGCATTCGGCGGCATGATTTTCATCCTTGTTTACTGCACTGCCGGCATCTCcgGCGGTCACATCAACCCTGCAGTGACATTTGGGCTGTTCTTAGCTCGTAAGGTGTCTCTAATTCGTGCTATAGCTTATATGGTGGCACAGTGCTTGGGTGCTATATGTGGTGTTGGTTTGGTTAAGGCCTTCATGAAAAACCCTTATAATCTTTTGGGAGGTGGTGCTAACTCTGTTGCTCCTGGCTACAACAAAGGCACTGCTCTTGGTGCTGAGATCATTGGCACCTTTGTGCTTGTTTACACTGTTTTCTCTGCAACTGATCCCAAGAGAAGTGCCCGAGACTCCCATGTCCCTGTTCTGGCTCCATTACCTATTGGTTTCGCTGTTTTCATGGTTCACTTGGCTACAATCCCCATCACTGGTACTGGTATCAACCCTGCTAGGAGCTTCGGAGCTGCTGTGATCTATAACAACGACAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGTCCATTTGTGGGAGCATTAGCAGCTGCGGCATACCACCAGTATATACTGAGGGCAGCAGCTATCAAGGCATTGGGATCCTTCCGAAGTAACCTTACCAACTA 842 0.4976 MSKEVSEEGQTLHGKDYVDPPPVPLIDVAELKLWSFYRALIAEFIATLLFLYITVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIAYMVAQCLGAICGVGLVKAFMKNPYNLLGGGANSVAPGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNLTN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00070 280 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Bva03g00070 280 TIGRFAM MIP: MIP family channel proteins 42 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 CDD MIP 38 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 202 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 242 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 SUPERFAMILY Aquaporin-like 30 264 IPR023271 -
Bva03g00070 280 Pfam Major intrinsic protein 31 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00070 280 PANTHER AQUAPORIN PIP-TYPE-RELATED 1 280 - -
Bva03g00070 280 Gene3D Glycerol uptake facilitator protein. 23 280 IPR023271 -
Bva03g00070 280 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 280 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00070 Bva-Chr3 532089 533701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00070 1 280 Major Intrinsic Protein MIP AT4G35100 90.714 0.0 528