Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00064 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCGAATTCGGATCGATATGCACGCAGCGGTTCAGATGCTGGAGGTAAACAGGATGGACTTTTATGGTACAAAGACTCTGGGCAGCACTTGAATGGTGATTTCTCTATGGCTGTGGTCCAAGCCAATAATTTGCTGGAGGATCAGAGCCAGATTGAATCGGGCAGTTTAAGCTCCAATGAATCTGGCCCATTTGGTACCTTCGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACGTCACGGTTTATCAACAATCACCTATTTCACCATCTCCAGAGGTTTACCGCAGAGCAAAAATCAATGTCAATGGATGTAATTCGCAAGGCATACCAAGCAACAGAAGAGGGATTTATGTCTCTTGTGGCCAGCCAGTGGCCAATGAATCCTCAAATTGCAGCGGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATGTGGCAAACCTTGGTGATTCCCGGGCTGTTTTGGGAAGACTTGTCAAGGCAACTGGGGAGGTTCTAGCCATACAATTGTCATCTGAGCACAATGTGGCAATAGAGTCTGTAAGACAGGAGCTACATTCTTTGCATCCTGATGACTCACACATTGTAGTTTTAAAGCATAATGTATGGCGTGTAAAGGGCCTTATACAAATTTCTAGATCTATTGGTGATGTATATCTGAAAAAGGCCGAGTTCAACAGAGAACCTCTATTTGGTAAGTTTCGACTGCGTGAGCCATTTAAGAGGCCAATATTAAGCTCAGAACCATCAATATCAGTGCATCAGTTGCAGCCTGAGCaccaatttataatatttgcatCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGACGCGGTTGATATCGTTCAAAATAATCCCCGCAGTGGAAGTGCAAGGAGGCTGGTGAAATCTGCCCTTCAAGAAGCAgcgaagaaaagagaaatgagaTATTCGGACCTGAAGAAAATTGATCGTGGCGTTCGTCGGCATTTCCACGACGACATCACGGTGATTGTGGTGTTTCTTGACTCTAATCTCGTGAGTAGGGCAAGTTCTGGCAAGTTCACTAGTATATCCGTCAGAGGGGGTGGTATCAACCTGCCTCATAACACGCTGGCTCCTTGTACAACACCAACAGAGACTGCTGGTTTGATATGCCAGAGAACTCAATGCCGATCGAAGGAATCAGCTTGCCAGAACACACATTATGAACTGCAGCTTGATGGAATTCCAAAATTGAACTTGGCTTCCTTTGTGACCACAGCCATGGAGGAAGAGTGCAATAAGCTCATAATGGAATCCATCAACAAGAACTACGTTGTCATGGATGAGTACCCTGTCGCCACTGAGCTCCACAATCGGTGTGTGAACATGATAGGGCGTCTGTTCAATGCTCCAATTGGAGAAAATGAGGATGCAATTGGAGTGGTAACGGTTGGCTCATCAGAAGCTATAATGCTAGCAGGTCTTGCATTGAAGAAGAGATGGCAGAACAAAAGGAAAGCTCAAGGCAAACCCTTTCACAAGCTCAACGTTGGCACCAGTGCCAACGTACAGGTTTGTTGGGAGAAATTTGCAAGGTGCTTTGAGGTGGAGTTGAAGGAAGTGAAGGTGAGGCAAGGATACTATAAAAGAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCAGCCAGTGGTGGCTTTATTGCCCGGCCCTTTCCTTTACGCAGAGCTTGAATGGGATTTCAGGCTTCTATTGGTGAAGAGCATTAATGTTAGTGGCCACAAAACTTGTTTTCCATATAATTACCTCGGTACTGATCAACCCACCTTCACTCTCAATTTTTCCAAAGGTTCTAGCCTGACCATTGCTCAATATTATCAGTTAATTTGTCTTGGCAAAGAGGGTTACCGAAGTGTGATGGAGAAATGTAGGGACAATGCTATGGTGCTAAAGGAAGGACTGGAGAAAATTGGATGCTTTAACATACTTTCAAAGGACAATGGTGTTCCTGTGGTGGCCTTTTCTCTCAAAGATGAGTATGAATTATCGGAGAAGCTGCGCCGCTACGGCTGGATTGTTCCGGCATA 2117 0.4459 MLSELMNFLRACFRPNSDRYARSGSDAGGKQDGLLWYKDSGQHLNGDFSMAVVQANNLLEDQSQIESGSLSSNESGPFGTFVGVYDGHGGPETSRFINNHLFHHLQRFTAEQKSMSMDVIRKAYQATEEGFMSLVASQWPMNPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRLVKATGEVLAIQLSSEHNVAIESVRQELHSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLFGKFRLREPFKRPILSSEPSISVHQLQPEHQFIIFASDGLWEHLSNQDAVDIVQNNPRSGSARRLVKSALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSGKFTSISVRGGGINLPHNTLAPCTTPTETAGLICQRTQCRSKESACQNTHYELQLDGIPKLNLASFVTTAMEEECNKLIMESINKNYVVMDEYPVATELHNRCVNMIGRLFNAPIGENEDAIGVVTVGSSEAIMLAGLALKKRWQNKRKAQGKPFHKLNVGTSANVQVCWEKFARCFEVELKEVKVRQGYYKRTSKLDGIHLFMLMQPVVALLPGPFLYAELEWDFRLLLVKSINVSGHKTCFPYNYLGTDQPTFTLNFSKGSSLTIAQYYQLICLGKEGYRSVMEKCRDNAMVLKEGLEKIGCFNILSKDNGVPVVAFSLKDEYELSEKLRRYGWIVPA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00064 705 Gene3D - 400 433 - -
Bva03g00064 705 Gene3D - 434 565 IPR015421 GO:0003824
Bva03g00064 705 Gene3D - 574 666 IPR015421 GO:0003824
Bva03g00064 705 Pfam Pyridoxal-dependent decarboxylase conserved domain 408 562 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva03g00064 705 Pfam Pyridoxal-dependent decarboxylase conserved domain 611 687 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva03g00064 705 Pfam Protein phosphatase 2C 76 325 IPR001932 -
Bva03g00064 705 Gene3D - 667 705 - -
Bva03g00064 705 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Bva03g00064 705 CDD PP2Cc 48 355 IPR001932 -
Bva03g00064 705 SUPERFAMILY PLP-dependent transferases 406 705 IPR015424 -
Bva03g00064 705 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bva03g00064 705 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Bva03g00064 705 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Bva03g00064 705 SMART PP2C_4 39 353 IPR001932 -
Bva03g00064 705 Gene3D - 37 365 IPR036457 -
Bva03g00064 705 SUPERFAMILY PP2C-like 56 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00064 Bva-Chr3 475586 485111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00064 1 396 PP2C-type Phosphatase Gene Family AT4G38520 75.253 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00064 - K01102 qsu:112028133 699.893