Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00049 ATGATGATGGAGGATAACGAGAGCTGTGGCAGTAGAGTGCACAACACGGCTTCAACTCGCCAACCGAGCAAGAAGCTTGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGTTTCCAAGGACCCCGAGGCTATGCAGCCTGGCTTCGATAATGAACTCTGGGCTCACTTCAACCGCCTTCCAACACGGTATGCACTGGATGTGAATGTGGAAAGGGCAGCAGATGTTCTTATGCACAAGCGGTTACTGCATTTGGCACATGATCCTGCTAATAGGCCTGCAATGGAAGTCCGCCTCGTCCAGGTTCATCCCATCTTTGATGGAAATTCAATTGATTATATTCATTCAGGAGCTGGTCAAAGCTCTTCAAAGTGCTCAAGCACACTGcgTAAACATCCGCCCCCTGCGTTTGGTTCCTCTCCTAATCTTGAAGCACTGGCACTCGAAGCAAATAACTCCAAAGATCTAGAGGAGGAACACTCTGTACATGCCAATATGCAATATTCTCAGCCTATGCATGAAATTACCTTCTCAACAGATGACAGGCCGAAGCTTCTCAGTCAGTTAACTTCTTTGCTTGCTGAGATTGGATTGAACATCCAAGAGGCGCATGCTTTTTCCACCACCGATGGTTACTCATTAGATGTGTTTGTTGTTGACGGATGGCCTTATGAGGAAACGAGACTTCTTCAAGCAGctataaagaaagaagtttTAAAGATTGAGAGGCAGACGTGGCCCATTCATCAATCATTATCTCCTGTTGGTGAGCCAGATCAAGAAGGGATGAAATGTGAACCTGATCATTTGACGATACCTAGTGATGGGACAGATGTTTGGGAAATAGACCCTAAgcatttgatatatgaaaacaGAATTGCAGATGGGCTATATGCTGAACTGTTTAAAGGTACATATTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAGGAAGAGCATGTAAATTCAGACTTGCTGAGAGAGTTTTCGCAGGAAGTTTTTATCATGAGAAAGGTTCGGCACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGTCCCCACGCGTGTGCATTGTAACAGaatttaTGTGTGGTGGAAGTGTGTATGACTACTTACATAAGCAGAATGGTGTTTTTAAATTTCCAACCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAACTACATGCACCAAAATAACATAATCCATAGGGATCTGAAGGCTGCCAATCTTTTGATGGACGAAAATTGTATTGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACAGGAACCTATAGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCCGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTACTCACTGGAAAGCTTCCATATGAATATTTGACCCCACTACAGGCAGCTATTGGAGTGGTTCAACAGGGTCTGCGACCCACCATCCCCAAGGCCACTCATCCGAAGTTTGTTGCTCTTCTAGAGAGGTGTTGGCAGCAAGATCCGACCTTAAGACCTGACTTCTCTGAAATTATTGAGATCCTGAAACAGTTAGCTAAGGAGGTTGGAGGCGAAGGGGACGGGCGCAGGGAGAAATCTGGGGGACTTTTTTCTGTTCTTAGACGAGGCCACCATCATcacta 1706 0.4367 MMMEDNESCGSRVHNTASTRQPSKKLEVYNEVLRRLKVSKDPEAMQPGFDNELWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAMEVRLVQVHPIFDGNSIDYIHSGAGQSSSKCSSTLRKHPPPAFGSSPNLEALALEANNSKDLEEEHSVHANMQYSQPMHEITFSTDDRPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYEETRLLQAAIKKEVLKIERQTWPIHQSLSPVGEPDQEGMKCEPDHLTIPSDGTDVWEIDPKHLIYENRIADGLYAELFKGTYCSQEVAIKVLKEEHVNSDLLREFSQEVFIMRKVRHKNVVQFIGACTKSPRVCIVTEFMCGGSVYDYLHKQNGVFKFPTLLKVAIDVSKGMNYMHQNNIIHRDLKAANLLMDENCIVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQQGLRPTIPKATHPKFVALLERCWQQDPTLRPDFSEIIEILKQLAKEVGGEGDGRREKSGGLFSVLRRGHHHH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00049 568 Gene3D Transferase(Phosphotransferase) domain 1 366 550 - -
Bva03g00049 568 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00049 568 MobiDBLite consensus disorder prediction 122 141 - -
Bva03g00049 568 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g00049 568 CDD STKc_MAP3K-like 293 536 - -
Bva03g00049 568 SMART serkin_6 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00049 568 CDD ACT_TyrKc 172 239 - -
Bva03g00049 568 SUPERFAMILY ACT-like 172 236 IPR045865 -
Bva03g00049 568 SUPERFAMILY Protein kinase-like (PK-like) 273 536 IPR011009 -
Bva03g00049 568 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 11 549 - -
Bva03g00049 568 Gene3D Phosphorylase Kinase; domain 1 274 365 - -
Bva03g00049 568 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 549 - -
Bva03g00049 568 Pfam Protein tyrosine and serine/threonine kinase 289 536 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Bva03g00049 568 ProSiteProfiles ACT domain profile. 174 253 IPR002912 -
Bva03g00049 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00049 Bva-Chr3 362545 368795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00049 4 565 MAP Kinase Kinase Kinase AT4G35780 64.903 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva03g00049 PK_Tyr_Ser-Thr 1.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00049 - - gmx:100805180 902.894