Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00041 ATGATTAGCTCCGAGAAGATCATCGAAATGTCAAGGAAGTGGCGGAAACATGTCACAaccagaaaaagaaggaagagaatcTCGAGGCCGAGAACTTGGGAAAATGCAAATGGAAAGGCAAAATGTTCCAGCAGCATAAGCAACAAAGCAGCGAAGGGTCACTTTGTAGTTTACAGCACGGATCAGAGGCGCTTTATGCTTCCCTTGATATATCTTAACACTGAAATCTTCAGAGAGCTCTTCAAGTTGGCAGAAGAAGAGTTCGGATTGTCAAGCAATGTGCCTCTTACATTGCCATGTGAAGGCACAGTACTTGAGTATGTAATTATGCTTATCCAACGAAACGTAGCTAAGGATTTGGAGGAAGCTGTCTTAATGTCTGTTGCTACTACTGCTTGCCAATCAACTCTGCACCTTCACCAACAACAAATTCTTTTGGCTAACCTATTCGTTGATTTTGAAGTGAATGTTGCCAGCTTGTG 482 0.4066 MISSEKIIEMSRKWRKHVTTRKRRKRISRPRTWENANGKAKCSSSISNKAAKGHFVVYSTDQRRFMLPLIYLNTEIFRELFKLAEEEFGLSSNVPLTLPCEGTVLEYVIMLIQRNVAKDLEEAVLMSVATTACQSTLHLHQQQILLANLFVDFEVNVASL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00041 160 Pfam Auxin responsive protein 16 112 IPR003676 GO:0009733
Bva03g00041 160 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 149 - -
Bva03g00041 160 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00041 Bva-Chr3 303327 303809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00041 43 120 Calmodulin-binding Proteins AT5G20810 36.709 4.88e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00041 - - gmx:100803097 152.91